Panicum virgatum (switchgrass): 120670300
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Entry
120670300 CDS
T07260
Name
(RefSeq) proteasome subunit beta type-6-like
KO
K02738
20S proteasome subunit beta 1 [EC:
3.4.25.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120670300
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120670300
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvir03051
]
120670300
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
120670300
Peptidases and inhibitors [BR:
pvir01002
]
Threonine peptidases
Family T1: proteasome family
120670300
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
beta type subunits
120670300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
NblA
Motif
Other DBs
NCBI-GeneID:
120670300
NCBI-ProteinID:
XP_039806320
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All DBs
Position
4N:complement(2752245..2756108)
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AA seq
245 aa
AA seq
DB search
MDSAHSCSSAAAGEAPTTGEHRMGTTIVGVCYEGGVVLGADSRTSTGMYVANRASDKITQ
LTDNVYVCRSGSAADTQVISDYVRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQA
GMIIGGWDKYEGGQIFSVPLGGTILRQPFAIGGSGSSYLYALLDHEWREGMSQEEAEKFV
VKVVSLAMARDGASGGVVRTVTINADGVKRNFYPGDKLPLWHEELEPQSSLLDILAAGNP
DPMVQ
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggactccgcgcactcgtgctcctccgccgccgcaggcgaggccccgaccaccggtgag
caccggatggggaccaccatcgtcggggtctgctacgagggcggcgtcgtcctcggcgcc
gactccaggactagcactggaatgtatgtagccaaccgcgcttcagacaagattactcag
ctgacagacaatgtctatgtctgccgctctggatctgctgctgatacacaagttatttcc
gactatgtgcgttatttcctccaccaacacacaattcagcttgggcaaccagctactgtt
aaagttgcagccaacttgattaggctgttagcttatcagaacaagaacatgttgcaagct
ggcatgattattggaggatgggacaagtatgagggaggccaaattttttcagttcccctt
ggcggaacaattctgcggcaaccatttgcaattggaggttcgggttccagttacctgtat
gcgcttcttgatcatgaatggagagagggaatgagccaggaagaggcagagaaatttgtg
gtgaaggtagtttcccttgctatggcccgtgatggtgctagtggaggagttgttcgtaca
gttactataaatgcggatggtgtcaagaggaacttttaccctggtgacaaacttcctctg
tggcatgaagagttggagcctcagagctccttgcttgatattcttgctgccgggaaccct
gaccccatggtgcagtga
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