Panicum virgatum (switchgrass): 120670408
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Entry
120670408 CDS
T07260
Name
(RefSeq) ubiquitin-conjugating enzyme E2 34-like
KO
K04554
ubiquitin-conjugating enzyme E2 J2 [EC:
2.3.2.23
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120670408
04120 Ubiquitin mediated proteolysis
120670408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120670408
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.23 E2 ubiquitin-conjugating enzyme
120670408
Ubiquitin system [BR:
pvir04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
120670408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UQ_con
RWD
DUF6264
Motif
Other DBs
NCBI-GeneID:
120670408
NCBI-ProteinID:
XP_039806426
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All DBs
Position
4N:complement(7328302..7332372)
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AA seq
240 aa
AA seq
DB search
MAEKSCLKRLQKEYHALCKEPPPQIVARPLPNDILEWHYVLEGSKGTPFEGGYYYGKLKF
PPDYPFKPPSISMTTPSGRFAPHKRICLSMSDFHPESWNPMWSVASILTGLLSFMMDDAL
TTGSIKTSDAEKRRLAKASLAYNCESKNCPHFRKLFPEYVEKYNQQQQLENTAAEPEPRE
NPAAPAPSPAVQQAPVVANRAQPVAEARREKNQKKAVPFWMVLVMFSVFGAVMALPLMQL
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaagagctgcctcaagcggctccagaaggagtaccacgcgctgtgcaaggag
ccgccgccgcagatcgtggctcgcccgctgcccaacgacatattggagtggcactatgtt
cttgaaggaagtaaaggcacaccctttgaaggcggatattactacgggaaacttaaattt
ccaccagattatccttttaaacctccaagcatcagcatgacaactccaagcggcaggttt
gctccacacaaaagaatatgcctgtcaatgagtgactttcatcctgaatcttggaatcct
atgtggtctgtagcaagcattcttactgggctcttgtcattcatgatggatgatgctctg
acaacaggaagcatcaagacttcagatgcagagaagagacgcttagccaaagcttccctt
gcatacaattgtgagagcaaaaactgcccacacttcaggaaactgttcccagagtatgtt
gagaagtacaaccaacagcaacaattggagaacaccgctgcagaaccagagccccgtgag
aatcctgctgcccctgctccatctcctgcagtccagcaagctccagttgtggccaataga
gcgcagccagtagcagaggcacgtcgcgagaagaaccagaagaaagcggtgcccttctgg
atggttctggtcatgttttcagtttttggtgccgtgatggccttgcccctaatgcaactt
tga
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