Panicum virgatum (switchgrass): 120670465
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Entry
120670465 CDS
T07260
Name
(RefSeq) T-complex protein 1 subunit epsilon-like isoform X1
KO
K09497
T-complex protein 1 subunit epsilon
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120670465
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pvir03037
]
120670465
04147 Exosome [BR:
pvir04147
]
120670465
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP60 / Chaperonin
120670465
Cilium and associated proteins [BR:
pvir03037
]
Primary cilia and associated proteins
BBS-CCT complex
120670465
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120670465
Exosomal proteins of colorectal cancer cells
120670465
Exosomal proteins of bladder cancer cells
120670465
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
120670465
NCBI-ProteinID:
XP_039806496
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All DBs
Position
4N:33157311..33162004
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AA seq
559 aa
AA seq
DB search
MALAFDEFGRPFIILREQEKKTRLRGLDAQKANIAAGKAVARILRTSLGPKGMDKMLQSP
DGDVTITNDGATILEQMDVDNQIAKLMVELSCSQDYEIGDGTTGVVVMAGALLEQAEKLL
ERGIHPLRVAEGYEMASRIAFDHLERISQKFEFSADNIEPLVQTCMTTLSSKIVNRCKRA
LAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELIYGIVVDKDMSHPQMPKRIE
DAKIAILTCPFEPPKPKTKHKVDIDTVQKFQTLRDQEQKYFDEMVQKCKDVGATLVICQW
GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSPEKLGKAGLVREKSF
GTTKDRMLYIEQCANSRAVTIFIRGGNKMMIEETKRSLHDALCVARNLIRNNSIVYGGGS
VEISCSIAVETAADRHPGVEQVFVDFGACSCKNYAIPSDCFFVVQYAIRSFADALEAVPL
ALAENSGLPPIDTLTAVKAQQVKESNPHCGIDCNDVGMNDMKEQNVFETLIGKQQQILLA
TQVVKMILKIDDVISPSEY
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgccttcgacgagttcgggcggcccttcatcatcctcagggagcaggagaag
aagacgcgcctgcgcgggctcgacgcgcagaaggccaacatcgccgcgggcaaggccgtc
gcgcggatcctccgcacctcgctcgggcccaagggcatggacaagatgctccagtccccc
gacggcgacgtcaccatcacaaatgatggcgccacgatcctggagcagatggatgttgac
aaccagattgcgaaactgatggtggagctgtcctgcagtcaagactatgaaatcggggat
ggtaccactggggtggtggtcatggcaggggctctcctagagcaggctgagaaacttctg
gaacgtggcattcacccattaagggttgctgaaggttatgagatggcatcaaggatagct
tttgatcaccttgagcgtatctcccaaaagtttgagttcagtgcggacaatatagaaccc
ctggttcagacctgcatgacgacactgtcatcaaagattgtaaaccgctgcaagcgggca
ctggcagagattgccgtcaaagctgtccttgcagttgctgatttggagaggaaggatgtt
aacttggatttaattaaagtagaaggcaaggttggtggaaagctggaggacacggagctc
atatatggaattgttgtcgacaaagatatgagtcacccgcaaatgccaaagagaattgag
gatgctaagatagctatcctgacttgcccatttgagcctccgaagcctaagacaaagcat
aaggttgacattgacactgtacagaaattccagaccctgcgcgatcaagagcagaagtac
ttcgatgaaatggttcaaaagtgtaaggatgttggtgcgacccttgttatatgtcaatgg
ggttttgacgatgaagccaatcatcttttgatgcacagaaatctgccagctgtcagatgg
gttggtggtgttgaattagaattgattgccattgctacaggaggccggattgttccgaga
ttccaagaactgagtcctgaaaagctcgggaaggctggattagtcagagagaagtcattt
ggaacaaccaaggaccggatgctttacattgagcagtgtgccaattccagagctgtaact
attttcattcgtggtggaaacaaaatgatgattgaggagaccaagcgcagtcttcatgat
gctctttgtgtggcaaggaatctaatccgcaataactcaatcgtgtatggtggaggctca
gtggagatatcttgctcgattgctgttgaaactgctgctgatcgacaccctggagttgag
caggtgtttgtcgactttggagcttgtagttgcaaaaattatgcaattccttctgactgt
ttctttgttgtgcagtatgctatcagatcatttgctgatgcattagaggctgttccacta
gccttagcagaaaatagtggtctgccgcccattgatacgttaactgctgtgaaagcacaa
caagttaaggagagcaacccccactgcggcatagactgcaatgatgttggcatgaatgac
atgaaggagcagaatgtctttgagactctgattggcaagcagcagcagatcttgcttgcc
acgcaggtggtgaagatgattctcaagatcgacgacgtgatctcgccatccgagtactga
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