Panicum virgatum (switchgrass): 120670485
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Entry
120670485 CDS
T07260
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER-related-like
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120670485
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120670485
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120670485
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf_RING_Vps8
zf-C3H2C3
zf-Nse
RINGv
VPS18_RING_C
PHD_NSD
zf-C3HC4_4
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
120670485
NCBI-ProteinID:
XP_039806523
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All DBs
Position
4N:1513112..1515679
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AA seq
257 aa
AA seq
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MATVGQPGALRRITVHYANSPTRSTGDADLDELEEDLLQSVFADLLPCQEGLHQSILEEA
SSNQNHMRGAPSDNSQSQHYHGESSTAAAASATASGTSGTEEQIASDFEYAKLLQEMEDL
SIEDDDISCVPSPSDSDDDHDHDHNDEEADRQDGNDDDPDNMTYEQRQALVEAVGTEDRG
LPDELISYLHTWKYKASGFFSRKTTNEDCPICLSTFRHRESMITLPCKHYYHAACVTKWL
KVNKTCPVCKYEPFGPC
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgtggggcagcctggcgccctgagaaggatcaccgtgcactacgccaactcg
cccacgcgcagcacgggagatgcggaccttgacgagctagaagaagacctgctccagtct
gtgttcgctgatcttcttccttgtcaggagggtttgcaccaatccatcttggaagaagca
tccagcaaccaaaaccacatgagaggtgccccatctgataattcacagtcacagcactac
catggggagagcagcactgctgcagcagcatcagcgactgcctccggaacttcaggaacg
gaagaacagatcgcctcggactttgagtacgccaagctactgcaggagatggaggacctg
agcatcgaagatgacgatatcagttgcgtaccctctccatcagactctgacgatgaccat
gaccatgaccataacgacgaagaggctgacaggcaggatggtaatgatgatgatccagac
aacatgacttacgagcaaaggcaagcactcgtggaagctgtggggactgaggacagaggt
ttacctgatgagctcatctcctatctgcacacatggaagtacaaggcttcagggtttttc
tccaggaagacaaccaatgaagactgtcctatctgcctgtctactttcagacaccgagaa
agtatgattacattgccgtgcaagcattactaccacgcagcttgtgtcaccaaatggctc
aaggtcaataagacctgccctgtctgcaaatatgaaccgtttggaccttgctag
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