KEGG   Panicum virgatum (switchgrass): 120670500
Entry
120670500         CDS       T07260                                 
Name
(RefSeq) DNA-dependent metalloprotease WSS1-like
  KO
K22685  DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pvir01002]
    120670500
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pvir03400]
    120670500
Peptidases and inhibitors [BR:pvir01002]
 Metallo peptidases
  Family M80
   120670500
DNA repair and recombination proteins [BR:pvir03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     120670500
SSDB
Motif
Pfam: WLM Zn_ribbon_RanBP zf-FPG_IleRS YgjP-like FAM76
Other DBs
NCBI-GeneID: 120670500
NCBI-ProteinID: XP_039806545
LinkDB
Position
4N:7161402..7165640
AA seq 349 aa
MEVGDLHKVWEVRELKRKPDAPAARALLDRIAKQVQPIMRRRKWRVKVLSEFSPRNPRLL
GLNVGKGIEVKLRLRRDGSDLDFIPYEEVLDTMLHELCHNERGPHDAQFYKLWDELRKEC
DELVSKGITGTGQGFDGTGRRLGGFTVYPPPPSLRQATAAAAQKRARNGALLPSGPTKLG
GNNYIMSVLSPVQAAAMAAERRMHDDLWCGSHDQSGIDDSDDVVILEEPPNLTARDGKTT
KGSCSNTIAEPSTSSGIHTAPRDGSSSFRTTSDAGDDSKWECGACTLLNQPLAPICEVCG
TAKPKIAKAKYATWSCKFCTLENSTKLDKCSACDQWRYSYGPPVTTYEH
NT seq 1050 nt   +upstreamnt  +downstreamnt
atggaggtgggcgacctgcacaaggtctgggaagtccgcgaactcaagagaaagcctgac
gcgcccgctgcccgcgcgctcctcgaccgcatcgccaagcaggtccagcccatcatgcgc
cgccgcaagtggcgcgtcaaggtcctctccgagttctcgccacggaaccccaggctgttg
gggctcaacgtcggcaagggcatcgaggtcaagctgcggctgcggcgcgacggcagcgac
ctcgacttcatcccctacgaggaggtgctcgacaccatgctccacgaactctgccacaac
gagcgcgggccccacgacgcgcagttctacaagctctgggacgaactccgcaaggaatgc
gacgaacttgtttcgaaaggtatcactggaacaggacaaggatttgatggtacaggaagg
cgactgggtggattcacagtatatccgccaccgccatctcttcgacaagctacagcagcc
gctgcacagaagcgggcaaggaatggagctctattgccatccggaccaacaaagttgggt
ggaaacaattacattatgagtgtacttagtccagtacaagctgctgctatggcagctgaa
aggagaatgcatgatgatttgtggtgtggatcccatgatcaatctggtattgatgattcg
gatgatgttgttattcttgaagaaccacctaacttgacagcaagggatggaaaaaccaca
aagggtagctgttccaacactattgcggagcccagcacttcgtctggaattcacacagca
ccacgagatggttcctcatcttttaggacaacaagtgatgcaggcgatgattcaaagtgg
gaatgtggtgcttgcactcttctaaaccagcctttggcgccaatatgtgaagtttgtggt
acggcaaaacctaaaattgcaaaggcaaagtacgcaacttggtcttgtaaattttgtact
ctagagaacagcactaagcttgacaaatgttcggcgtgcgatcaatggagatactcatat
gggccaccagtaaccacctatgaacattga

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