Panicum virgatum (switchgrass): 120670823
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Entry
120670823 CDS
T07260
Name
(RefSeq) chlorophyll a-b binding protein 1B-21, chloroplastic
KO
K08907
light-harvesting complex I chlorophyll a/b binding protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00196
Photosynthesis - antenna proteins
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
120670823
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
pvir00194
]
120670823
Photosynthesis proteins [BR:
pvir00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCI
120670823
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Gene cluster
GFIT
Motif
Pfam:
Chloroa_b-bind
Motif
Other DBs
NCBI-GeneID:
120670823
NCBI-ProteinID:
XP_039806922
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All DBs
Position
4N:complement(16301504..16302909)
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AA seq
296 aa
AA seq
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MAGSIWISPIPLRLRPLVVLLIAAADSAPALKRHSSLSSRLGLRISGIGAAAMAMASSSG
LRSCSAVGVPSLLAPSSRSGRLPFCASATTSGRVTMSAEWMPGQPRPAHLDGSSPGDFGF
DPLGLATVPENFERFKESEVYHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATY
LGNPVPWGTLPTILVIEFVAIAFAEHQRTMEKDPEKKKYPGGAFDPLGFSKDPVKFEEYK
LKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTIYP
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcagcatttggatatcccccatcccgcttcgtctccggccgctggtggtgctc
ttaatagcagccgcagattctgctcccgctctcaaacgccactcctccctctcctctcgt
ctcggcctcaggatcagcgggatcggagcagcagcaatggcgatggcgtcgtcgagcggg
ctccggagctgcagcgccgtgggcgtgcccagcctgctggcgccgtcgtcccgctccggc
cggctgccgttctgcgccagcgccaccacctcgggccgcgtcaccatgtccgccgagtgg
atgcccggccagccccgccccgcccacctcgacggctcctcccccggggacttcggattc
gaccccctcggcctcgccaccgtgccggagaacttcgagcggttcaaggagtcggaggtg
taccactgccgctgggccatgctcgccgtgcccgggatcttggtgccggaggcgctgggg
cttggcaactgggtgaaggcgcaggagtgggcggccgtgcccggcgggcaggccacgtac
ctgggcaacccggtgccgtggggcactctgcccaccatcctggtgatcgagttcgtggcc
atcgccttcgccgagcaccagcgcaccatggagaaggaccccgagaagaagaagtacccc
ggcggcgccttcgacccgctcggcttctccaaggaccccgtcaagttcgaggagtacaag
ctcaaggagatcaagaacggccggctggcgatgttggcgttcgtggggttctgcgtgcag
cagtcggcgtacccgggcacggggccgctggagaacctggccacccacctcgccgacccg
tggcacaacaacatcggcgacatcatcatccccagaacgatctacccttga
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