Panicum virgatum (switchgrass): 120670870
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Entry
120670870 CDS
T07260
Name
(RefSeq) heat stress transcription factor C-2b-like
KO
K09419
heat shock transcription factor, other eukaryote
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120670870
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
120670870
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GFIT
Motif
Pfam:
HSF_DNA-bind
DBC1
Motif
Other DBs
NCBI-GeneID:
120670870
NCBI-ProteinID:
XP_039806982
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Position
4N:complement(31836348..31838357)
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AA seq
256 aa
AA seq
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MAAGGGAAAPFVWKTYMMVEDPGTDGVIGWGRGNNSFVVADPFVFSQTLLPAHFKHNNFS
SFVRQLNTYGFRKVDPDRWEFAHASFLRGQTHPLRNIVRRGSSAAGGGGGKRKDAGSAEP
SADDMAMVATEVVRLKQEQRAIDDRVASMWRRVQETERRPKQMLAFLLKVVGDRDRLHRL
VGDAAAPDAPSGEAAAAAEGGEKRARLLLDGDGGIGSFGPDAVDFAGFYSGGGALGDVAV
DAPGGGSFAFGVDKGY
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcggcggcgcggcggcgccgttcgtgtggaagacgtacatgatggtggag
gatccagggacggacggggtcatcggctggggccgggggaacaacagcttcgtcgtcgcc
gaccccttcgtcttctcgcagacgctgctgcccgcgcacttcaagcacaacaacttctcc
agcttcgtgcgccagctcaacacctatggcttccgcaaggttgatccggaccggtgggag
ttcgcgcacgcgtcgttcctgcgcggccagacgcaccccctgcgcaacatcgtccgccgc
ggcagcagcgccgcgggaggaggcggcggcaagaggaaggacgccggctccgcggagccc
tccgcggacgacatggccatggtggccacggaggtggtgcgcctcaagcaggagcagcgc
gccatcgacgaccgggtggcctccatgtggcgccgcgtgcaggagaccgagcgccggccc
aagcagatgctcgccttcctcctcaaggtcgtcggcgaccgcgacaggctgcaccgcctc
gtcggcgacgccgccgcgccggacgccccctccggcgaggcggccgccgccgcggagggc
ggcgagaagcgggccaggctgctgctcgacggcgacggcggcatcgggtccttcggccct
gacgccgtcgacttcgccgggttctacagcggcggcggcgcgctcggcgacgtcgccgtg
gatgcccccggcggcggctcgttcgcgttcggcgtcgacaaggggtactga
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