Panicum virgatum (switchgrass): 120670937
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Entry
120670937 CDS
T07260
Name
(RefSeq) GPI mannosyltransferase 1-like
KO
K05284
GPI mannosyltransferase 1 subunit M [EC:2.4.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
120670937
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120670937
Glycosyltransferases [BR:
pvir01003
]
GPI-anchor biosynthesis
Core oligosaccharide
120670937
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Mannosyl_trans
PIG-U
HHO5_N
Motif
Other DBs
NCBI-GeneID:
120670937
NCBI-ProteinID:
XP_039807068
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Position
2K:complement(20505894..20508737)
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AA seq
445 aa
AA seq
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MASAGGGALTLRRVLLASAALRLALVVFGEWQDAHLEVRYTDVDYLVFSDAAASVAAGGS
PFARATYRYSPLLAFLLLPNSLLHAVWGKLLFSAADLLVGLFIDTILKLRGIPEKMRMWS
VIAWLFNPFTFTIGTRGNCEPIVCAAMLWILICLMKGRVLQAAFWYGLIVHFRIYPIIYA
IPFVIVLGKSYAGPSGRPTLTMWNSEQHLQNDKASQREGPTSVLAILRDFLSNFLTRNAI
LFGLLSGFMFFAWTGVFFYLYGWDFLNEALLYHLTRTDPRHNFSIYFYHIYLHHQQGFSS
IQRLASFLPQLIVQLALIARFSRDLPFCMFLQTVAFVAFNKVMTAQYFVWFFCLLPLILP
WNSMNLKWKGLACMLVWMGSQLHWLMWAYLLEFKGRNVFVQLWVAGLVFLAANTFVMLMV
IKQHKYTPLFSSPVKPGSKVATKKE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgccggcggcggcgccttgacactccggcgggtgctgctcgcgtctgccgcg
ctccggctagcactggtggtgttcggggagtggcaggatgcccaccttgaggtgcgctac
accgacgtcgactacctcgtcttctccgatgccgccgcctccgtcgccgccggcgggtcc
ccgttcgcccgcgcgacctaccgctactctccgctcctggccttcctgcttcttccgaac
tcgctcctccatgctgtctggggcaagctcctcttctccgccgcagatttgctagtggga
ttgttcatagacaccattctgaaactacgtggaatccctgagaaaatgcggatgtggtct
gtgatagcttggctgttcaatcccttcacattcaccattggcacaagaggaaactgcgag
ccaatagtctgcgctgccatgctctggattctcatatgtttgatgaagggtagagtattg
caggcagcattctggtatgggcttatcgtgcacttcagaatatacccaatcatatatgcg
attccttttgtaattgttctcgggaagagttatgccggtccttctggtaggcctactctt
acaatgtggaactccgaacaacacttgcaaaatgacaaagccagtcaaagagaaggacca
acatcagtactggccattctacgggatttcctttcaaactttttgacaagaaatgcaatc
ctatttgggctactctcaggatttatgttctttgcctggactggtgttttcttctatctt
tatgggtgggacttcctaaacgaagcattactttaccatcttactcggactgatccaagg
cacaatttctcgatatatttctatcatatatatctacatcatcaacaagggttctcaagt
attcagaggcttgcatcgtttctgcctcaactgatcgtgcaactggcactcatcgctcga
ttctctagggaccttccattttgcatgtttctccaaactgttgcatttgttgcttttaac
aaggtgatgacggcacaatactttgtgtggttcttctgcctgttgcccctcatcctccct
tggaacagcatgaaccttaagtggaaaggtctggcctgcatgctagtgtggatggggtct
caattgcactggctcatgtgggcttacctgctggaattcaagggcagaaatgtctttgta
cagctctgggttgcaggcctcgtgtttctagctgccaacacctttgttatgctcatggtg
atcaagcaacacaagtacaccccactcttctcgtcaccagtgaagcctggcagcaaggtt
gctaccaagaaggaatag
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