Panicum virgatum (switchgrass): 120671090
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Entry
120671090 CDS
T07260
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP63-like
KO
K09566
peptidyl-prolyl isomerase G (cyclophilin G) [EC:
5.2.1.8
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120671090
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120671090
Enzymes [BR:
pvir01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
120671090
Spliceosome [BR:
pvir03041
]
Complex C
Other components
PPlases
120671090
Chaperones and folding catalysts [BR:
pvir03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
120671090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
120671090
NCBI-ProteinID:
XP_039807263
LinkDB
All DBs
Position
4N:complement(39789252..39798575)
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AA seq
498 aa
AA seq
DB search
MARKKNPFVFLDVSIGDDHAGKMVFELFADVVPKTAEDFRALCTGEKGVGKTTISPLYYR
GTKFHKIMKGVMAQGGDFSKNNGTGGESIYGGTFEDENFVLRHDYRGLLSMANTGPNTNG
SQFFITFKPAPHLDRKNTVFGKLILGDDVLTKIECVDVDGLTPLVRVKIVDCGMHIDIND
YGSMASKNDKVKADNSNLSNGIASGGDNSEHKLRSYSRWSSKGRGSSISPRGPIKRPSIH
PVESSRSTSPTRLPVESSRSTSPTRQSINMGLRERSSSRSPSRCASRSLDTPLSRSRSKN
ASSSGAQTRSFSGRSGSHLPRRNQNASPEGSPVQRRMSRSPSRRRRVSSTRSVSWSPSRR
SKRRKIRSHRRSSGRSSVHSPTSHHQPRRSSSRGASPPCSHRARLPSPDNVRSLSRSGGS
SHGSPKRIRKGRGFTRRYSFVQRYRSPTSNRLSVRSDHYGGRNNRERYATYQSSHYHRRY
RSPSIGRASSRRRTWSRS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaaagaaaaatccctttgttttcctagacgtgtcgattggtgatgatcatgca
gggaaaatggtttttgagctgtttgctgatgttgttccaaagacagctgaggactttcga
gcgttgtgcacaggagagaagggagttggaaaaacaactatatcaccactctattatagg
ggcacaaaatttcacaagattatgaagggagtcatggcacagggtggcgacttctcgaaa
aacaatgggactggtggagagagtatatatggtggaacatttgaagatgaaaattttgtc
ttacgccatgattatcgtggtctattatcgatggcgaatactggaccgaacacaaatggt
tcgcaattcttcattacattcaagcctgcacctcatcttgacaggaagaacactgtcttt
ggcaagcttattcttggagatgatgtgttgacgaagattgagtgtgttgatgttgatggt
ttgacacctcttgttcgagtgaaaatagtggattgcggtatgcatattgacatcaatgac
tatggatctatggcaagcaaaaatgataaagtgaaagctgataactcaaatctctccaac
ggcatagcttctggtggagataatagtgagcataaactaaggagttatagtaggtggtct
tcaaaagggagaggtagtagtatcagtccgagaggcccaatcaaaaggccgtctattcac
cctgttgaaagcagtaggagcactagtccaaccaggctgcctgtcgaaagcagtaggagc
actagtccaaccaggcagagcatcaacatggggcttcgtgaacgaagctccagcaggagc
ccgtctagatgtgctagcagaagtcttgatacaccactttctagaagcagaagcaaaaat
gcaagttcctctggtgctcaaacaagaagttttagtgggagatcggggagtcacttgcca
cggaggaaccagaatgcaagtccagaaggatctcctgtgcagagaagaatgagcagaagc
ccaagcaggagaagaagagtaagctcaactcgaagtgttagctggagcccatcaagacgc
tctaagaggagaaaaatccgaagccacaggagatcatctgggagaagttctgtgcatagc
cctacatcacatcatcaacctcgtaggagcagtagcaggggtgctagtccaccttgtagt
cacagggcaagattaccctcacctgataatgttagaagcctgtccaggagtggtggttct
tctcatggatctccaaagcgcataagaaagggccgtggtttcactcggcgttactcattt
gtacaaagataccgatcacccacttccaatcgcttatctgttaggtcagaccactatggt
ggaagaaacaatcgtgaaaggtatgcaacctatcaaagctcgcattatcacagacggtat
agaagcccttccattggaagagcatcatctcggcgtaggacttggagccgtagctga
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