Panicum virgatum (switchgrass): 120671123
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Entry
120671123 CDS
T07260
Name
(RefSeq) transcription factor TGAL8-like isoform X1
KO
K14431
transcription factor TGA
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120671123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120671123
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
120671123
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DOG1
bZIP_1
bZIP_2
Motif
Other DBs
NCBI-GeneID:
120671123
NCBI-ProteinID:
XP_039807304
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All DBs
Position
4N:complement(41252593..41257721)
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AA seq
453 aa
AA seq
DB search
MAYPSTSGMVQASSSLHGIIRRDPEGYDMPSDLDQALLLYFDGQQQAANRPSIQEQQPQT
LNIFPSQPMHIEPSPKGSMSSSAAAAQVAGPSKTSKAAPSKAGGGPLAAGKSSKAAIKRE
GSAGGKHGGAGAGPSSSDQEGPRTPDPKTLRRLAQNREAARKSRLRKKAYIQQLESGRIR
LAHLEQEMQMARTHQGALWGTGTLSPDAALFNLEYERWLGDHSKVVARLRAAAEEHRPDG
ELRAYADEAASHYGALMGLKARAAAADPLHLLSGLWKGAAERCFLWIGGFRPSELIKVAV
RHVEPLAEQQAAGARDVEQAARRAEEALDAELEALLRSLSEVVASDAQPPPPGVFGGQLY
PHLPGADAAGYMGMGHMHMALAMDKLATLGTSLRQADELRMQALQALRQILTARQAARCF
VAVDDYFCRLRALSTLWTTTRAAPPQLARGPAG
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatccatctacctccggcatggtccaagcttcttcatccctccatggcatcata
agaagggacccagaaggatatgacatgccatccgatctggatcaagccctactcctctac
ttcgatggccagcaacaagcagctaacaggccatcaattcaagaacaacaaccgcagact
ctcaacatcttcccttcccaaccaatgcacatcgagccatccccaaagggctccatgtct
tcttcagcggcggcagcacaggtcgccggcccttccaagacctcgaaagcggcgccgtcg
aaggccggaggtgggccgctcgccgcaggcaagagctccaaggcagcgatcaagagagaa
ggtagcgccggcggcaagcatggcggcgccggcgcggggccttcgagctcggatcaggag
gggccccggacgccggaccccaagacgctccggcggctggcgcagaacagggaggccgcg
aggaagagccggctgaggaagaaggcttacattcagcagctagagtcaggcaggatcagg
ctggcgcatctagagcaggagatgcagatggcaagaactcatcagggtgctctatggggt
acaggaaccctaagcccagacgccgcgctgttcaacctggagtacgagcggtggctgggc
gaccacagcaaggtggtggcccggctgcgcgccgccgcggaggagcaccggccggacggc
gagctgcgggcgtacgccgacgaggcggcctcccactacggcgcgctgatggggctcaag
gcccgggccgccgccgccgacccgctccatctcctctctggcctctggaagggcgccgcc
gagcgctgcttcctctggatcggcggcttccgcccctccgagctcatcaaggtcgcggtg
cggcatgtggagccgctggcggagcagcaggcggcgggggcgcgcgacgtggagcaggcg
gcgcggcgcgcggaggaggcgctcgacgccgagctggaggcgctgctgcggtcgctgtcc
gaggtcgtcgcctccgacgcgcagccgccgccgccgggggtgttcggcggccagctctac
ccgcacctcccgggcgccgacgcggcgggctacatggggatggggcacatgcacatggcg
ctcgccatggacaagctcgccaccctcggcacctccctcagacaggcggacgagctgcgg
atgcaggcgctgcaggcgctccggcagatcctgacggcgaggcaggcggcgcgctgcttc
gtcgccgtcgacgactacttctgccgcctccgcgcgctcagcacgctctggaccaccacc
cgggcggcgccgccgcagctggcgagaggccccgccgggtag
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