Panicum virgatum (switchgrass): 120671175
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Entry
120671175 CDS
T07260
Name
(RefSeq) granule-bound starch synthase 1, chloroplastic/amyloplastic-like
KO
K13679
granule-bound starch synthase [EC:
2.4.1.242
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120671175
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120671175
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.242 NDP-glucose---starch glucosyltransferase
120671175
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Storage polysaccharide
120671175
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
Glycos_transf_1
Glyco_trans_1_4
GT4-conflict
Glyco_transf_4
Motif
Other DBs
NCBI-GeneID:
120671175
NCBI-ProteinID:
XP_039807387
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All DBs
Position
4N:2159652..2164328
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AA seq
603 aa
AA seq
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MAALATSQLATTHAGFGLGGDTSMFRRGVQGLRGPRPSAGALSVRTSARAAPRQQSRRPQ
RGGGRLPSLVVCAAAGMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRY
DQYKDAWDTSVVSEIKVGDRYETVRFFHCYKRGVDRVFIDHPSFLERVWGKTGEKIYGPD
AGVDYKDNQRRFSLLCQAALEAPRILSLNNNPYFSGPYGEDVVFVCNDWHTGPLSSYLKS
NYQSNGIYRNAKTAFCIHNISYQGRFAFSDYPELNLPERFRSSFDFIDGYEKPVEGRKIN
WMKAGILEADKVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDK
YIATKYDVSTAIAAKALNKEALQAAAGLPVDRKIPLVAFVGRLEEQKGPDVMAAAIPQLM
EEDVQIVLLGTGKKKFERMLMSAEEKYPDKVRAVVKFNAALAHHIMAGADLLAVTSRFEP
CGLIQLQGMRYGTPCVCASTGGLVDTVIEGKTGFHMGRLNVDCKVVEPADVQKVASTLKR
AIRVVGTPAYEEMVRNCMIQDLSWKGPAKNWEKVLLSLGVAGSQPGIQGEEIAPLAKENV
AAP
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctggcaacgtcccagctcgccaccacccacgccggcttcggcctcggcggc
gacacctccatgttccgccgcggcgtccagggcctgagggggccccggccctcggcgggc
gcgctcagcgtgcggaccagcgcgcgcgcggcgccccggcagcagtcccgccggccgcag
cgcggcgggggcaggctcccctccctcgtcgtctgcgccgccgccggcatgaacgtcgtc
ttcgtcggcgccgagatggcgccctggagcaagaccggaggcctcggcgacgtcctcggc
ggcctcccgccggccatggccgcgaatggccaccgcgtcatggtcatctccccccgctac
gaccagtacaaggacgcctgggacaccagcgtcgtgtccgagatcaaggtgggggacagg
tacgagacggtgaggtttttccactgctacaagcgcggagttgaccgtgtgttcatcgac
cacccatcgttcctggagcgggtttggggaaagaccggtgagaagatctacgggccagac
gctggagtggactacaaggacaaccagcggcgtttcagcctgctttgccaggcagcactt
gaagctcctaggatcctgagcctcaacaacaacccctacttctcaggaccgtacggggag
gatgtcgtgttcgtctgcaacgactggcacaccggccctctgtcgagctacctcaagagc
aactaccagtccaacggcatctacaggaacgcaaagaccgctttctgcatccacaacatc
tcctaccagggccggttcgcattctcggactacccggagctgaacctccctgagagattc
aggtcatccttcgatttcatcgacggctacgagaagcctgtggagggcaggaagatcaac
tggatgaaggccggtatcctggaggccgacaaggtcctcaccgtgagcccctactacgcc
gaggagctcatctctggcatcgccaggggctgcgagctcgacaacatcatgcgcctcact
ggcatcaccgggatcgtcaacggcatggacgtcagcgagtgggaccccagcaaggacaag
tacatcgccaccaagtacgacgtgtcgacggccatcgccgccaaggcgctgaacaaggag
gcgctacaggccgcggccggcctccccgtggaccggaagatcccgctggtggcgttcgtc
ggcaggctggaggagcagaagggccccgacgtcatggccgccgccatcccgcagctcatg
gaggaggacgtccagatcgtccttctgggcaccgggaagaagaagttcgagcgcatgctg
atgagcgcggaggagaagtaccccgacaaggtgcgcgccgtggtgaagttcaacgcggcg
ctggcgcaccacatcatggccggcgccgacctgctcgccgtcaccagccggttcgagccc
tgcggcctcatccagctgcaggggatgcgatacggcacgccctgcgtgtgcgcgtccacc
ggtgggctcgtcgacaccgtcatcgaaggcaagaccggattccacatgggccgcctcaac
gtcgactgtaaggttgtggagccggccgacgtgcagaaggtggcgagcaccctgaagcgc
gccatcagggtggtgggcacgccggcgtacgaggagatggtcaggaactgcatgatccag
gacctctcatggaagggccctgccaagaactgggagaaggtgctgctcagcctgggggtc
gccggcagccagccggggatccaaggcgaggagatcgcgccgctcgccaaggagaacgtg
gccgcgccctga
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