Panicum virgatum (switchgrass): 120671187
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Entry
120671187 CDS
T07260
Name
(RefSeq) stromal processing peptidase, chloroplastic-like isoform X1
KO
K25894
stromal processing peptidase, chloroplastic [EC:3.4.24.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120671187
Peptidases and inhibitors [BR:
pvir01002
]
Metallo peptidases
Family M16: pitrilysin family
120671187
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Motif
Pfam:
Peptidase_M16_C
Peptidase_M16
Motif
Other DBs
NCBI-GeneID:
120671187
NCBI-ProteinID:
XP_039807404
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Position
4N:complement(41888626..41900374)
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AA seq
1259 aa
AA seq
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MASAPFPPVAAAAASAPPRLAPRHPFAAAAAARRSSLSFRPAARRPALPLRSSAAAANPL
RCAHRRAVSPRSRRRAQGFGAASASASDLAASTWGAAAGSDGCLSCFPKSRRGRSGLGRF
APCALPHASGLSFRGRLSGAKVRSSHILRAAGPDEPHVASPTWSETSLDKPDLDHTISKE
ELDDVLNTPLPEHPKLIRGQLKNGLRYLILPNKVPANRFEAHMEVHVGSIDEEDDEQGIA
HMIEHVAFLGSKKREKLLGTGARSNAYTDFHHTVFHIHSPTKTKEYCEDLLPSVLDALNE
IAFHPKFSSSRVEKERRAILSELQMMNTIEYRVDCQLLQHLHSENKLSNRFPIGLEEQIQ
KWDPDKIRRFHERWYYPANATLYLVGEIDDIPKAMREIEAVFEHTLSENEGNPLPGGSPF
GAMASLFAPKLPGGFAANLTGEKSPVTDKIKHVKRERQAVRPPVEHKWSLPGVAQDAKPP
AIFQHELIQSFSINMFCKIPVSKVQTYKDLRSVLMKRIFLSALHFRINTRYKSSNPPFTS
VELDHSDSGREGCTVTTLTVTAEPQNWRSAIKVAVHEVRRLKEFGVTMGEMTRYMDALIK
DSEQLAMMIDSVPSVDNLDFIMESDALGHTVMDQLQGHESLLAVAETVTLEEVNTVGAEV
LEFISDFGKPNAPLPAAIVACVPKKVHVDGVGETDFEIYPDEITEAIKSGLDEPIYPEPE
LEVPKELITQSELDELKSQHKPSFVPLTEEDNVVEVFDTETGIAQRRLSNGISINYKITQ
NEARVGVMRLIVGGGRATEDSESKGSVIVGVRTLSEGGCVGNFSREQVELFCVNNLINCS
LESNEEFIFMEFRFALRDSGMRAAFQLLHMVLEHNVWLEDAFDRATQLYLSYYRSIPKSL
ERSTAHKLMLAMLNHDERFVEPSPHSLQKLTLQSVKDAVMNQFEGGNMEVSIVGDFTEEE
VESCVLDYLGTVRAASSPNTEERIEKISFRPFPSDLHFQQVYIKDTDERACAYIAGPAPN
RWGFASEGNDLFNVIQRSGADAEISEPVNLDLTGKKHIDVRSHPLFFGITLSLLAEIINS
RLFTTVRDSMGLTYDVSFELNLFDKLDLGWYVIAVTSTPSKVHKAVDACKGVLRGLHSSR
IVERELDRAKRTLLMKHEAETKTNAYWLGLLAHLQSSSVPRKDVSCIKELTTLYESATIE
DLYLAYEHLKVDDSSLFACIGIAGAESGEDMNDDEVDMDLHGMAPMGGRGLSTMTRPTT
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgcccccttcccgcccgtcgcggcggcggcggcctccgcgccgccgcgcctg
gccccgcgccaccccttcgccgcggccgccgccgcgcgccgctcctccctctccttccgc
cccgccgcgcgccggcccgccctcccgctccgctcctccgccgccgcggccaacccgctc
cgctgcgcgcaccgccgcgccgtctcgcccaggtcgaggagacgagcgcaaggcttcggc
gcggcgtcggcgtcggcgtcggatttagcggcgtccacttggggcgccgccgcggggagc
gacgggtgcctctcgtgcttccccaagagcaggcggggccggtcggggctcgggaggttc
gcaccgtgcgcgctcccgcacgcgtcggggctctcgtttcgcggccggttgagcggcgct
aaggtcaggtctagccatatattacgtgctgctggacctgatgagccacatgttgcaagt
ccgacatggtctgaaacttcccttgataaacctgatctggaccatactattagtaaggag
gagcttgacgatgttctcaacactccgcttcctgagcacccaaagctaatacggggccaa
ttgaagaatggccttcggtatcttattttaccaaacaaagttcctgcaaacaggtttgag
gctcacatggaagttcatgttggatcaattgacgaggaggatgatgagcagggaattgca
catatgattgaacatgttgcatttcttggcagtaaaaagcgtgaaaagctattaggaacc
ggtgcaaggtctaatgcatatacagacttccaccatacagtgttccatatccactctcca
actaaaacaaaggaatactgtgaggacttactcccttctgtgctggatgcattgaatgag
atagcttttcatccaaagttttcatcatctcgtgttgagaaggagagaagagcaattctt
tctgagctccagatgatgaacacaatcgagtatcgtgttgattgtcagttgttgcaacat
ctgcactcagaaaacaaactgagcaacagatttcctattggacttgaagagcaaatacag
aaatgggatcctgataagatccgcagatttcacgagcgctggtactaccctgctaatgcc
actttgtatctggtgggagaaattgatgatattcccaaagctatgcgggaaatagaggct
gtatttgaacatactctttcagaaaatgaaggaaaccctctaccaggcggtagtccattt
ggcgctatggcaagcctttttgcaccaaagctcccgggtggctttgctgcaaacctaact
ggtgaaaaatcacctgtcacagataaaataaagcatgtaaagagggaaagacaagcagtt
agaccacctgtagagcataagtggtcccttcctggagttgctcaggatgccaaaccgcca
gcaatttttcagcatgagttgattcagagtttctctatcaatatgttctgcaagatacct
gttagcaaagttcagacgtacaaggacctacgtagtgtgctcatgaaaaggatatttttg
tctgccctacattttcgaatcaatacgagatacaagagttcaaaccctccttttacgtct
gttgagctggatcacagtgactcaggaagggaagggtgtacggtcactactcttacagta
actgctgaaccccagaactggagaagtgcaatcaaagttgctgttcacgaggtgcggagg
cttaaagaatttggcgttacaatgggagaaatgacccgttatatggatgcactaataaaa
gatagtgagcagctggctatgatgatcgacagtgtgccctcagttgataacttggacttc
atcatggagagtgatgcacttggccatactgttatggatcagttgcagggacatgaaagt
ttgcttgcagttgctgaaactgtcacccttgaagaggtcaacactgttggtgcggaagtg
ctggagttcatttcagattttggcaaacccaatgctccacttcctgctgctattgttgcc
tgtgtccccaaaaaggtgcatgttgatggcgtaggtgaaactgattttgagatatatcca
gatgaaatcactgaggctatcaagtcaggccttgacgaacctatttacccagaacctgag
cttgaggtgcctaaggaattgattactcaatcagagctcgatgaactgaaatcgcaacac
aaaccgtcatttgttcctttaaccgaagaagataatgtggtggaagtgtttgacactgaa
actggtatagcacaacgccgtctttctaatggaatttccatcaactacaagatcacacaa
aatgaagcgagggttggtgtcatgcggctgatagtaggcggagggagagcaacagaagat
tccgaatcaaagggatctgtcattgttggtgttcgtaccctgagtgaaggtggttgtgtt
ggtaacttttcaagggaacaggttgaacttttctgtgtgaataatcttatcaactgctct
ctggaatccaatgaagaattcatatttatggaatttagatttgctttaagagacagtggc
atgcgtgctgctttccaactcctccatatggtccttgagcataatgtgtggctagaagat
gcatttgatagagcaactcagttatatctgtcttactatcgctctatccccaaaagtttg
gaacgttctacagctcataagcttatgttagccatgctaaaccatgacgaaaggtttgta
gagccgtcaccacattcattgcagaagctgactcttcagtcagttaaagatgctgtgatg
aaccagtttgaggggggcaacatggaggtcagcattgttggtgatttcactgaagaagaa
gtagaatcttgtgttcttgattatcttgggactgtgagggctgcaagttctccaaacaca
gaggagcgtattgaaaagatttccttccgaccatttccatcagatctgcatttccagcaa
gtatacataaaggacacagatgagagagcctgtgcgtatattgcaggccctgcacctaat
cgttggggatttgctagtgaaggaaatgacctatttaatgtcattcagcgatctggtgct
gatgcagaaatatccgaaccagtaaacttggatctaacagggaagaaacacattgatgtt
cgcagccaccctcttttcttcggcatcactttgagtctgcttgctgaaattatcaattct
aggctgtttacaacagttcgagattccatgggattaacatatgatgtttcttttgaatta
aacctttttgacaaattggatcttggttggtatgtgattgctgtcacgtcaactccgagc
aaggttcataaagctgttgatgcatgcaaaggtgttctgagaggattacatagcagccga
attgtggaaagggagcttgaccgggcaaagaggacgttgttgatgaaacacgaggctgag
acgaagacaaatgcctattggctcggtttgctagcccatctacagtcttcatctgtgcca
agaaaggatgtatcgtgtatcaaggaattgacaacgttgtatgaaagtgccacaatagag
gatttgtatcttgcgtatgagcatctcaaagttgatgattcttctttgtttgcttgcatt
gggattgctggcgctgaatctggtgaagatatgaatgatgatgaggttgatatggatctt
catggtatggctcccatgggaggccggggtctttcaacaatgaccagaccgacaacatga
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integrated database retrieval system
