Panicum virgatum (switchgrass): 120671196
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Entry
120671196 CDS
T07260
Name
(RefSeq) probable galactinol--sucrose galactosyltransferase 6
KO
K06617
raffinose synthase [EC:
2.4.1.82
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00052
Galactose metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
120671196
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.82 galactinol---sucrose galactosyltransferase
120671196
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Gene cluster
GFIT
Motif
Pfam:
Raffinose_syn
Motif
Other DBs
NCBI-GeneID:
120671196
NCBI-ProteinID:
XP_039807414
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Position
4N:5537575..5541121
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AA seq
643 aa
AA seq
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MTIASSVKLAGGTLSVRGRTVLSGVPAAVAASSAAAAGAVDGVFIGADLAEPASRHVISL
GTLRGVRFMACFRSKLWWMSQRMGDKGGDVPHETQFLLVESRGAGGEDEAAAAYVVFLPL
VGGAFRASLQGGAGDALELCVESWDDDTRAASVERALFVGAVASDPFAGVAGAVAAARSA
LKTFRVHAEKKLPGIVDYFGRCTWEAGTPSTRTSRRRASRPGSAASSPAARRPSSSSSTT
AGRWQSVGTDQPGPDDHAGEATRLRLPRLTGIKENSKFQNVEDPAAGIKTVVRAAKEEYG
LKYVFVWHAITGYWGGVRQGAAGMERYRSSMQFPKISPGVAENDPGMTTDWITAQGVGLV
HPRAVYRFYDEQHAYLAAAGVDGVKVDEQCILETLGAGHGGRAQLTRQYHQALDASVAKN
FPENGIIACMSHNTDALYCSKQTAVVRASDDFFPRDPASHTIHIAAVAYNSVFLGEFMLP
DWDMFHSLHPAGEYRGSARAISGGPVYVSDAPGKHDFELLKKIVLPDGSVLRARLPGRPG
DQGLLVHRPGTRRRQLAQDMEHEQVHRRPRGVQLPGRGVELRGEEDHVPPRWRRRPDLRR
EEQRRPPRLRGRDGPRSVERRLRRVTSRLPEAGPVYIWQFSRT
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgcatcatccgtcaagctcgccggcggcacgctgtcggtccgcggtaggacg
gtgctgtccggcgtgccagccgccgtggcggcgtcctctgcggcagcggccggagcggtc
gacggggtcttcattggcgccgacctcgccgagccggcgtcccgccacgtcatctccctc
ggcaccttaaggggcgtgcgtttcatggcgtgcttccggagcaagctatggtggatgtcg
cagcggatgggggacaagggcggcgatgtcccgcacgagacgcagttcctgctcgtggag
tctaggggcgccggtggcgaggacgaggcggcggctgcgtacgtcgtgttcctcccgctg
gtggggggcgcgttccgggccagcctccagggcggcgccggcgacgcgctggagctctgc
gtcgagagctgggacgacgacacgcgcgcggcgtccgtcgagcgcgcgctcttcgtgggc
gccgtggcgtcggaccccttcgcgggcgtcgcgggcgccgtcgccgccgccaggtccgcg
ctcaagacgttccgggtccacgccgagaagaagctcccgggcatcgtggactacttcggg
cggtgcacctgggaggctgggacgccttctaccaggacgtcacgcaggagggcgtcgagg
ccgggctccgcagcctcgtcgccggcggcgcgccgcccaagttcgtcatcatcgacgacg
gctgggcgctggcagtccgtcggcacggaccagcccggccccgacgaccacgccggagag
gccacgcggctgcgcctgcctcggctcaccggtatcaaggagaacagcaagttccagaac
gtggaggacccggccgccggcatcaagacggtggtgcgcgcggcgaaggaggagtacggg
ctcaagtacgtcttcgtctggcacgccatcaccggctactggggcggcgtccgtcagggc
gccgccgggatggagcgctaccgctccagcatgcagttccccaagatctcgccgggcgtc
gccgagaacgatcccggcatgacgaccgactggatcaccgcccagggggtcggcctggtg
cacccccgcgccgtgtaccggttctacgacgagcagcacgcgtacctcgccgccgccggg
gtcgacggcgtcaaggtggacgagcagtgcatcctggagacgctcggcgccggccacgga
ggccgcgcgcagctcaccaggcagtaccaccaggcgctcgacgcgtccgtcgccaaaaac
ttccccgagaacggcatcatcgcgtgcatgagccacaacaccgacgccctctactgctcg
aagcagacggcggtggtgagagcgtcggatgatttcttcccgagggaccccgcgtcgcac
acgatccacatcgccgcggtggcgtacaacagcgtgttcctcggcgagttcatgctcccg
gactgggacatgttccattccctccaccccgccggcgagtaccgcggctcggcccgtgcg
atcagcggcggccccgtctatgtcagtgatgcccccgggaagcacgacttcgagctgctg
aagaagatcgtcttgccggacggctcggtgctccgcgcgcgcctgcctggccggccgggc
gaccaaggactgcttgttcaccgacccggcacgcgacggcgtcagcttgctcaagatatg
gaacatgaacaagttcaccggcgtcctcggggtgtacaactgccagggcgcggcgtggag
cttcgtggagaagaagaccacgttccaccacgctggcgtcggcgccctgacctgcggcgt
gaagagcagcgacgtccacctcgtctccgaggccgcgacggaccccgatcagtggagcgg
cgactgcgccgtgtaacctcccgcctccccgaggccgggcccgtttacatctggcagttt
tctaggacatag
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