Panicum virgatum (switchgrass): 120671387
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Entry
120671387 CDS
T07260
Name
(RefSeq) exportin-7-A-like isoform X1
KO
K18460
exportin-7
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120671387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120671387
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
120671387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBN_N
Motif
Other DBs
NCBI-GeneID:
120671387
NCBI-ProteinID:
XP_039807623
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All DBs
Position
4N:43795910..43813363
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AA seq
1056 aa
AA seq
DB search
MSSMESLAQLEVLCEKLYNSRDSAERAHAESTLKCFSENSEYISQCQYILDNATTPYALM
LASSSLLKQVSDRSLSLQLRLDIRSYVINYLAGRGPKLQNFVIVSLIQLVCRITKFGWFD
DDRFRETVKEATDFLGLASQDHYFIGLKILNNLVTEMNQPNAAMPTTLHRKIASSFKDQF
LLQIFQISLTSLNQLKSEAPDDFGYIPLDLALKCLSFDFVGSPVDESSEEFGTVQLPASW
RPLLQDPSTVQIFFDYYKVNDTRVSKEALECLVRLASVRRSIFVEDPARSQFLSHLMAGT
KEILQTGQGLADHDNYHEFCRLLGRFKVNYQLAELLSVEFYGEWIGLVAEFTTRSLLSWQ
WASNSVYYLLSFWSRLVTSVPYLKGETPSLLDETVPKITEGFITSRINSVQAILADNSLE
NPLDGVEVLQDQLEFLPYLCRFQYQNSSLYIINIIEPLLQAYTERSRLPAPGDADELSVI
EGQIAWMVHIIAAILKIRQTVGVSQESQELIDAELSARVLKLISMTDTGAHAQRYQELSK
QRLDRAILIFVQNFRRSYVGDQSMHSSKQLYTRLSELLGLNDHLVLLNVIIGKIATNLKC
YAECEDVIDHTLSLFLELASGYMTGKLLLKLESVKFIIASHSQENFPFLAEYKCSRSRTT
FYYILGSLVFMEDSPVKFRTFMEPLQQVAFNLEATPDAAFWNDVAKRAFIGWMRDLRGIA
MATNSRKTYGLLFDWLYPSRMPLLLRAITRWTDEPEVTTPLLKFMCEFVLNKAQRLTFDS
ASPNGILLFREVSKIIVAYGSRILLCPNGTDIYGSKYKGIWISLTVLSRALCGNYVNFGV
FELYGDRALADALDISLKMTLSVPLSDILAFRKLSKAYFGYMEVLFNNHIKFVLNLDTNT
FVHIVSSLESGLKGLDTGISTQCASAIDSLAAFYFNNITAGDAPPSPAALNLARHIGEFP
NLFPQMLRTLFEIILFEDAGNQWSLSRPILSLIMTSEQMFSDLRAHILASQAVDQQQRLS
QCFDKLMTDVSRNLEPKNRDRFTQNLTSFRHDFRLK
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaatggagagcctagcacagttagaggtgctgtgtgaaaagctttataattct
agagactcggctgagagagcgcatgcagaaagcaccctcaagtgcttctcagagaacagc
gagtacatttcacagtgtcaatacatattggacaatgctacaactccatatgctctgatg
ctggcgagttcaagcttgttgaagcaagtttcggaccgcagtctttctttgcagctccgc
ctcgatatacggagttatgtcataaactatcttgctggaagggggcccaaattgcagaat
tttgtcattgtgtccctaattcagctggtttgtcgaattacaaaatttggatggtttgat
gatgacagattcagagagactgtgaaggaagcgacagatttcttaggtcttgcatctcag
gatcattatttcataggattgaagatactaaacaatctcgtaacagaaatgaaccagcca
aacgctgcgatgcctacgacacttcataggaaaattgcgagctcattcaaggaccagttt
cttctacaaattttccaaatttcattaacctcactaaaccaactgaagagtgaagctccg
gatgactttggatatattcctcttgaccttgcattgaagtgcttgtcatttgacttcgtt
ggttctccagtggatgaaagctctgaagaatttggaacggtgcagcttcctgcatcttgg
agacctctcctacaagatccttccactgtccagatcttttttgattactacaaagtcaat
gacacacgtgtttcaaaagaggctttggaatgtctggtgcgacttgcttctgtcaggcgc
agtatttttgttgaggaccctgctaggtcccagtttctttctcatctgatggcaggcaca
aaggaaatacttcaaactggccaaggtcttgctgatcatgacaactaccatgagttctgc
cgtcttttgggacgtttcaaagtgaattaccagctggcagagcttctgagtgttgagttc
tatggtgaatggattggtctagtagctgaatttacaactagatccttgctgtcatggcag
tgggccagcaatagtgtctactatcttctaagtttttggtcaaggctggtgacatctgtg
ccttacttgaaaggtgaaacgccaagtctgcttgatgaaaccgttcccaaaatcacagaa
ggtttcatcacttctagaattaattctgttcaggccatcctcgctgacaactcattggaa
aatcctttggatggcgtggaagttctccaggaccagttggagtttcttccttacctttgc
agattccagtaccaaaacagtagcctgtacatcataaacatcatagaacctcttcttcaa
gcttacacggaaaggtcaagattaccagctcctggagatgctgatgagctctctgtcatc
gaaggacaaattgcatggatggtccacataattgcagccattcttaaaattaggcagacc
gttggtgttagccaagaatcacaagaattaatcgatgcagaactatctgcccgtgtgtta
aagttgataagtatgactgatacaggagcccacgcacagcgatatcaagaattaagcaag
caaaggcttgaccgagctattctaatctttgtgcaaaatttcagaaggtcatatgttgga
gaccaatccatgcattcttcaaagcagttgtatacaagattgtctgagcttctagggctg
aatgaccatttagttttactcaatgttattattgggaaaattgctacaaatctgaagtgc
tatgctgagtgtgaggatgttattgatcatactctgtctctattcctggagcttgcatct
ggctatatgactggaaagctgctgctcaagctggagagtgtaaagttcatcatcgcaagt
cattctcaggagaatttcccatttcttgcggagtacaaatgttcccgtagtagaactacg
ttctattacatccttggctccttagtcttcatggaagacagccctgtaaaattcaggact
ttcatggaaccgcttcagcaggttgcatttaacctggaggcaactcctgatgctgctttc
tggaatgatgttgctaagcgtgcatttattggttggatgagagatttacgaggcatcgcg
atggccaccaacagccgcaagacctatggcctcctatttgactggctgtatccgtctcgc
atgccacttctattgagagccatcacacggtggacagacgaaccagaggtcaccacaccc
ttgctcaagttcatgtgtgaatttgttttgaacaaagctcaaaggttgacatttgattca
gcatcaccaaatgggatccttttgttccgagaggttagcaagataattgtggcttatggg
tcgcgaattctgttgtgtcccaatggcacagatatttatggaagtaaatacaaaggcata
tggatctcactgactgttctttcaagggctttgtgtgggaactatgtcaattttggtgta
tttgagctctatggtgacagagcacttgcagatgcccttgatatatctctaaagatgact
ctctcagttccattatctgatatattggcattcagaaagctgtcgaaagcatactttgga
tatatggaagttctgttcaacaaccatatcaagtttgttctcaatttggacacaaacaca
tttgttcatattgtcagctctcttgagtctggcttaaaaggtctagatacagggatatca
acacagtgtgcttctgccattgacagcctggcagccttttatttcaataatattacagct
ggtgacgcacctccgtcaccagctgcattaaatctcgctcggcatattggagagttcccc
aatttgtttcctcagatgctgaggacactttttgagatcattctctttgaggatgctggt
aaccagtggagtctcagcaggccaatattgagcttgataatgactagtgaacagatgttc
agtgacctgagagcgcacatattagcatcacaggctgtcgaccaacaacaacgcctttcc
caatgctttgataagctgatgactgatgtcagcaggaacttggaacctaagaaccgagac
agattcactcaaaatctgacatcatttagacatgatttccggttgaagtaa
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