Panicum virgatum (switchgrass): 120671426
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Entry
120671426 CDS
T07260
Name
(RefSeq) probable histidine kinase 1
Organism
pvir
Panicum virgatum (switchgrass)
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Gene cluster
GFIT
Motif
Pfam:
HATPase_c
Response_reg
HisKA
sCache_3_3
PAS_4
Cache_3-Cache_2
Motif
Other DBs
NCBI-GeneID:
120671426
NCBI-ProteinID:
XP_039807680
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Position
4N:44062183..44069510
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AA seq
971 aa
AA seq
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MGDEYLAEPENEVAQSMWPENIGEKHQRQFKMEKFRKDQDAFKDVKFDQKPVHVDFQRLI
EMANSEKGVSHMQYFMKHWEYKRAKAAQLLEEELGLLSQQRKEIEQNKQQILEEQRFQDE
SYYAVKRHVPILDEAYEDEWKRPSKKNDELSRNREPKIDVDYDSVAYWKERATQLEKTLE
ESIQRERSLVEKIEENIKNLQSDTPAEEFSGMLKRADYFLHLVLQSAPIVIAHQDADLRY
RFIFNHYPTLADEDVIGKTDYEILSGEGIEEMNSVKREVMTSGIATKREFAFNTPMFGAK
TFVTYIEPVFSKGGETIGVNYVAMDITDQVKRREKMADIRVREAIQNAKETELSRSLHIT
EETMRAKQMLATMSHEIRSPLSGVLSMAEILATTKLDKEQYQLLQVMLSSGDLVLQLIND
ILDLSKVESGAMKLESTTFRPREVVQHVLQTAAASLKKELTLEGCIGDDVPVEIIGDVLR
IRQILTNLISNAIKFTHEGKVGINLQVVHEQQPGCKMEHKKIHKQAYPGTPITTAAENSS
LSSRNCDTDTLNCSKHEDVVQNGVPTCENFREDHEREEVVWLRCDVYDTGIGIPEKSLPL
LFKRYMQASADHARKYGGTGLGLAICKQLVELMGGTLTVVSRENEGSKFTFVLPCKIPVK
EEHSDDPDEVHSSQNGFTNSDIEGSFLFKPQMRTSLMSTGVSVINNSKLFGAKLMCYDPP
DILDDHKPFSNGFISKEQNFASCTSDAHQSNGASVRSTAEKQHDDEIVLELTSQAERISS
SQGDTVSVSGSSCQKTGPCKILEEQSLHKKSKCSPIGNKAKILLVEDNRVNIIVAKSMLE
QLGHGIDIVNNGMQAIRAVQHHQYDLILMDVHMPEMDGLQATKHIRSFESTGFWDASVKP
EHDLMIADPAISSDCTHAKRQGQRVPIIAMTANSFSESADECLAAGMDSYISKPVNFQNI
KECLQRYLPSQ
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgaatacctggccgaacctgagaatgaggttgcgcagtcaatgtggcctgag
aatataggagagaaacaccagagacagttcaaaatggaaaagtttaggaaggaccaagat
gcttttaaggatgttaagttcgatcagaagcctgttcatgtggattttcagcggcttatt
gaaatggcaaattctgaaaaaggtgtttctcatatgcaatactttatgaagcactgggaa
tataagagagccaaagctgctcagcttctggaggaagagcttggtcttctcagccaacag
aggaaagagattgagcaaaacaagcaacaaatcttggaggagcaacggtttcaggatgag
agttattacgccgtaaagcggcatgtacctatactggatgaagcttacgaagatgaatgg
aagcgtccgagtaaaaagaatgatgaactttctcgtaatagagagcctaaaatagatgtg
gactacgatagtgttgcctattggaaagagagagcaactcagttagaaaaaacacttgag
gaaagcattcaaagggagcgttcgttggttgaaaaaatagaggaaaatataaagaatcta
cagtcagacacaccagcagaggaattctctgggatgttaaaacgtgctgattacttcttg
cacttggttcttcaaagtgctcctattgttattgcccatcaggatgctgatttacggtac
cgtttcatttttaatcactatccaacacttgctgatgaggatgttatcggtaagacagac
tatgagatattgtcaggtgagggcatagaagagatgaatagtgtcaagcgagaagttatg
acttccggaatagcaactaaaagagaatttgcatttaacacaccaatgtttggagcaaag
acatttgtgacatacattgagccagttttcagcaaaggtggggaaacaattggtgtgaat
tatgttgcaatggacataacagatcaggtcaaaagaagagagaagatggcagacataagg
gtgagggaagctatccaaaacgccaaggaaacagaacttagcagatctcttcacataaca
gaggaaacaatgcgagcaaaacaaatgctagccaccatgtcccatgagatcagatctcca
ctttcaggtgttcttagcatggccgaaattcttgcaaccaccaaactggataaagagcaa
taccagttgctacaagttatgttatcctctggagatcttgtattgcagctgatcaatgac
atccttgatctttctaaagtggagtcaggggctatgaaactagaatctacgacgttcaga
ccaagggaagtagttcaacatgtactccaaactgctgcagcttctctgaagaaggaattg
acccttgaagggtgcataggtgatgatgttccagtggagatcattggtgatgttctaagg
attcgacaaattctgaccaacttgatcagcaacgcaatcaagtttacacatgaagggaag
gttggcataaatcttcaggttgtgcatgagcagcaaccaggatgcaaaatggaacacaag
aaaattcataagcaagcttatcctggcaccccaattactactgcagcagaaaattcttct
ctctcttcaagaaattgtgatacagatactttgaactgctcgaagcatgaagatgttgtt
cagaatggcgttccaacatgtgaaaacttcagggaggatcatgagagggaggaagtcgtt
tggcttcggtgtgatgtttatgacactggaataggaataccagagaagtcattaccattg
ctctttaagaggtacatgcaagccagtgctgatcatgcaagaaaatatggtgggacaggg
cttggccttgcaatttgcaagcagttggtggagttgatgggtggtactctgactgtagtc
agtagagagaatgaaggatcaaaatttacatttgtgctgccttgcaaaatccctgtaaaa
gaggagcatagtgatgatccagatgaagtgcacagttctcagaatggtttcactaacagt
gacatagaaggttccttccttttcaagccacaaatgagaacttctctcatgtcgacagga
gtttcagtaataaacaactcaaagttattcggtgccaagctaatgtgctacgatccacct
gacatattagatgatcacaaaccattctcaaatggcttcatatcaaaggaacagaatttt
gcaagttgtacctctgatgctcaccagtcaaatggtgctagtgtaaggagcacagctgaa
aaacaacatgatgatgaaatagtccttgaactgactagtcaagccgaacgtatttccagt
tcccaaggagacacagtatctgtttcaggttctagctgtcagaaaacaggaccatgcaaa
attctcgaagaacaatcactccacaagaaatccaagtgttctccaattggcaacaaggca
aagatcctcctagttgaagataatcgggtcaacataatagtggcaaaatcaatgctggag
cagctgggacatggaatagatatcgtaaataacgggatgcaagcaatccgtgcagttcag
catcatcaatatgatcttattctgatggatgttcacatgccagaaatggatggcctacaa
gccactaaacatatccgttcttttgagagcaccggcttttgggatgcttctgtgaagcct
gaacatgatctgatgatagctgaccctgccatttcatcagattgtacacatgcaaaaagg
caagggcagagggttcctataattgcgatgacagcaaattcattttccgagagtgctgat
gaatgccttgctgcaggcatggactcctacatatctaagcctgtgaactttcagaatata
aaagaatgcctgcagcggtatttgccgtctcaatga
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