Panicum virgatum (switchgrass): 120671456
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Entry
120671456 CDS
T07260
Name
(RefSeq) transcription factor TGAL3-like
KO
K14431
transcription factor TGA
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120671456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120671456
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
120671456
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Gene cluster
GFIT
Motif
Pfam:
DOG1
bZIP_1
bZIP_2
CC_Bre1
Motif
Other DBs
NCBI-GeneID:
120671456
NCBI-ProteinID:
XP_039807725
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Position
4N:9380541..9383536
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AA seq
562 aa
AA seq
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MCSWPSHGVPTPCASASLPLITNPGSRCGARRLVPSSASPFTSIHGARRGSSRRGPPSLA
VALLAAAAAALLSSLSPSIPALRCIPTLRTPSGRSRPRWQHVVRHAHAWPGASGSLTPCC
LAPRRLVCRAEQGAGGYHHHHRGVGDGALLPELPRSPNPSSKSSSNLTAATLLAPLAVAH
GGVAPSFGMAPPGMASAADDGRFCLPWAAAHFENWGDSGGIVVTSPLTETTCTDADDASG
DRQPAQMGGGAITQSVAAYMDSCAASKEGSCRDQKVQRRLAQNREAARKSRMRKKAYIVE
LESSRAKLAQLEQELQRARQQGMFIASGRTGDHGGSTGGASAAFDLEYARWLDEHQRHMT
DLRVALGAQLGDDDLRVLVDGAMLHYEQLFRLKGAATRADVFHVLSGMWVSPAERFFMWL
GGFRSSELLAVLARQVEPLTEQQLVGLCSLRQSSQQAEDALSQGIEALQQALADTLAAAG
ASAAGAAADGVTNYMGQMAVAMGKLATVENFLRQADLLRQQTLQQMRRILTTRQAARALL
VVSDYFSRLRALSSLWLTRPRD
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcttggccctcgcacggcgtccccaccccctgtgcttcggcctcccttcccctt
ataaccaaccccggcagcagatgcggtgcccggcgtctcgtcccgtcctcagcctcaccg
ttcacatccatccacggtgcacggcgcggcagcagccgtcgtggtccgccgtccctcgcc
gtcgcattgctcgccgccgccgccgctgctttgctctcgtccctgtcgccgtccatcccc
gccctacgatgcatccccacccttcgcacgccttcaggtaggtccaggccgcgatggcaa
cacgtggtgcgccacgcgcacgcctggcccggcgcgtccggctcgctaacgccttgttgc
cttgccccccgccgcctcgtgtgcagggcggagcagggcgcgggcggataccaccaccac
caccgcggcgtcggggacggcgccctcctccccgagctcccgcgcagccccaaccccagc
tccaagtcctccagcaacctcaccgccgccaccctccttgcgccgctcgccgtcgcgcat
ggaggggtagcgccctcgttcggcatggcgccgccggggatggcctcggcggcggatgac
ggccggttctgcctgccgtgggcggcggcgcacttcgagaactggggcgactccggcggc
atcgtcgtcacgagcccgctcaccgagacgacctgcaccgacgccgacgacgccagcggc
gacaggcagccggcgcagatgggtggtggagccatcacgcagagcgtcgctgcttacatg
gattcatgcgcggcgtccaaggaaggatcgtgcagggatcagaaggtgcagaggaggctt
gcgcagaaccgcgaggctgcccggaaaagccggatgaggaagaaggcgtacattgtggag
ctggagagcagccgggcaaagctggcgcagcttgagcaggagcttcagcgggcgaggcag
caggggatgttcatcgcaagcggacgcaccggcgaccatggaggctccactggaggcgcg
tcagcggcgttcgacctggagtacgcgcggtggctggacgagcaccagcggcacatgacc
gacctccgcgtggccctgggcgcgcagctcggcgacgacgacctgcgcgtgctggtggac
ggcgcgatgctgcactacgagcagctgttccggctcaagggcgcggcgacccgcgccgac
gtgttccacgtgctgtcggggatgtgggtgagccccgcggagcgcttcttcatgtggctg
ggcgggttccggtcgtcggagctgctcgcggtgctggcgcggcaggtggagccgctgacg
gagcagcagctggtgggcctctgcagcctgcggcagtcgtcgcagcaggccgaggacgcg
ctatcgcagggcattgaggccctgcagcaggcgctggcggacacgctcgcggccgccggg
gcgtcggcggcgggggcggcggcggacggcgtgaccaactacatggggcagatggccgtg
gccatgggcaagctcgccaccgtggagaacttcctccggcaggcggacctgctccggcag
cagacgctgcagcagatgcggcggatcctgaccacgcggcaggccgcgcgcgcgctgctc
gtcgtcagcgactacttctcccggctccgggcgctcagctccctgtggctcacgcggccg
agggactga
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