Panicum virgatum (switchgrass): 120671600
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Entry
120671600 CDS
T07260
Name
(RefSeq) conserved oligomeric Golgi complex subunit 7-like
KO
K20294
conserved oligomeric Golgi complex subunit 7
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120671600
Membrane trafficking [BR:
pvir04131
]
Endosome - Golgi transport
Tethering complex
Conserved oligomeric Golgi (COG) complex
120671600
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Gene cluster
GFIT
Motif
Pfam:
COG7
Sec10_HB
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
120671600
NCBI-ProteinID:
XP_039807914
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Position
4N:complement(45375104..45380185)
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AA seq
820 aa
AA seq
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MVVVDASEFGAEGFDPKQWINAALDARHPSEPLDRFLADAEERLRAAADDAAAALERDSG
DALRRVPLACRDALRLRDDAVALRAHLASVLQSLNLAEGSSAESIAALAQIDTVKQRMEA
AYTTLQDAAGLAQLSQSVEDVFSSGNLPKAAETLATMRHCLSAVGEVAEFANVRKQLEVL
EERLDEMVQPRLVDALSNRKVDAVQDLRGILIRIERFKSLEAQYTKIHVKPLKKLWEDFD
LKQRASRLDMEKLGGESINGLSFSSWLPNFYDETLLYLEQEWKWCLTAFPEEYKSLVPKV
LVETMSELNSSFVSRVNIATGDVVPETRSVSKGILDVLSGDLPKSTKLQNKHLQALIELH
NMTGTFARNIQHLFSESDLAVVLNTLKAIYSPYETFKARYGQMERAILSAEMASIDIRGA
VPRGVGAQGIELSEAVRRMEESIPQMIVLLEAAVERCISLTGGSEADELVIALDDIMLQY
ISNLQETLKSLRIVCGLESDTLKKDSGLEKREAHRLVDVSEEEEWSIVQGALQILTVADC
LTSRTSVFEASLRATLARIGTNFSLSGFGSSLDKSPVAIADENADLPLGGRAALDIAAIR
LSDLPEKSKKLLTVLEQSKDTRFHALPLTSQRVAAFSDTVNELVYDVLISKVRQRLSDVA
RLPIWSSVEEQGGLPLPSFSAYPQAYVTSVGEYLLTLPQQLEPLAEGISGNEAGNDEAQF
FATEWIFKVAEGATALFMEQLRGIHYITDRGAQQLAADIEYLNNVLSALSMPIPPFLSTF
HSCVSTPRDQVRGLIKSDGGSQLDLPTTHLACKIRRISLD
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggtggacgcgtcggagttcggggcggaggggttcgacccgaagcagtggatc
aacgcggcgctggacgcgcggcacccgtcggagccgctcgaccgcttcctcgccgacgcc
gaggagcgcctgcgcgccgcggccgacgacgccgcggccgcgctcgagcgtgacagcggc
gacgccctccgccgcgtcccgctcgcgtgccgcgacgcgctccgcctccgcgacgacgcc
gtcgccctgcgcgcgcacctcgcctccgttctccaatccctcaacctggctgagggctca
tctgctgagtcaatagctgcactagcgcaaattgatactgtgaaacaacgcatggaagca
gcatatacaacattgcaggatgcagctgggttagctcagttgagccagagtgttgaggat
gtgttttctagtggcaatcttccaaaggctgcagaaaccctggcaacgatgagacattgc
ttgtcagcagttggagaggttgcagagttcgcaaatgtgagaaaacagcttgaagtattg
gaagaaaggttagatgaaatggtgcagcctcgtttagtggatgcactttctaatcgcaag
gttgatgctgtgcaagatcttcgtggtatactgatacgtatcgaaaggttcaagtcactg
gaggcgcagtacactaaaatccatgttaaacctctaaagaaactttgggaagattttgac
ctaaagcaaagagccagcagattagacatggagaagcttggtggtgaaagcattaatggt
ctctcattctcaagctggctgcctaatttctatgatgagacactgctttaccttgaacaa
gaatggaagtggtgcttgactgctttccctgaagaatacaaatcactagtaccaaaagta
cttgttgagaccatgagtgagttgaattcaagctttgtttctcgtgtcaacatagcaact
ggggatgttgtccctgaaactagatctgtttccaaaggtatactggacgttctatcaggt
gacttaccaaaaagcaccaagttgcagaataagcatcttcaagcactaattgaactgcac
aatatgactggcacttttgctaggaacattcagcacttattttcagaatcagatcttgca
gttgtgctgaatactctgaaagctatttattccccatatgaaacctttaaagcgaggtat
gggcagatggagcgtgctattctttctgctgagatggcaagtattgacatccgtggggcc
gtccctcgtggtgttggtgcacagggtatagagctgagtgaagctgtccgcagaatggag
gaatccatcccgcaaatgatagtacttcttgaagcagctgtagagagatgcattagtctt
actggtggttcagaggcagatgaactggtaattgctcttgatgacatcatgcttcaatac
atatctaatctacaagaaacattgaaatccctgaggatagtctgtgggctggagagtgac
accttgaagaaagattcaggtttagagaaaagggaagcacaccgattggtagatgtttct
gaagaggaagaatggtctattgtccaaggtgctttgcagattcttacagtggctgattgc
ctgactagcagaacctcagtatttgaagcttctttaagagccacacttgccaggattgga
acaaacttttctctttctggctttggttcaagcctggataaatcacccgtagcaattgct
gatgagaatgcagacttgcctcttggagggcgggctgcacttgatattgcagctattcgc
ctaagtgatctgccagaaaagtctaagaagctcttaactgtgctagagcagtcaaaagat
acaaggttccatgctcttcctctcacatcacagagagttgcggccttctcagacaccgta
aatgaactcgtctatgatgtgctcatatctaaagttcggcaacgtctcagtgacgttgct
cgcctcccaatctggtcatcggtggaggagcagggtggtcttcctcttccaagcttcagt
gcctacccacaagcttatgtgaccagtgttggagagtatctcctcactttaccacagcag
ttggagccacttgcagaaggtatctcaggcaacgaggctggcaatgacgaagcccagttc
tttgccactgagtggatttttaaggttgccgagggtgccactgctttgttcatggagcag
ctgcgtggaatccactacatcaccgatcgaggcgcgcagcagctcgctgcggacattgag
tacctgaacaacgtcctctctgcgctctcgatgccgatccctccgttcctgtccaccttc
cactcctgcgtctcgaccccgagggaccaggtccgtggtctcataaaatcagacggcgga
agccagctcgacctccctactacccatttggcgtgcaagatccggcggatctcactagat
tag
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