Panicum virgatum (switchgrass): 120671611
Help
Entry
120671611 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 52-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120671611
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120671611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120671611
NCBI-ProteinID:
XP_039807931
LinkDB
All DBs
Position
4N:complement(32682010..32684156)
Genome browser
AA seq
555 aa
AA seq
DB search
MCTTTPMPPAPPMALVGGKGGHHVYVTVPQRAEGDAAGHCGRQLKCRAVPLPVAGETVRE
AAALCRLAFPIALTALLLYSRTALSMLFLGSIGDLPLAAGSLAVAFANITGYSVLSGLSL
GMDPLCSQAFGANQARLLGLTLYRSVLFLLCCSLPLSALWLNMSKILVFLGQDREITALA
QEYILFSLPDLFSFSIIHPLRVYLRSQGITRPLAAAAAAAVLFHVPANYVLVGRLGLGAP
GVAAAASASNFVLLGVLLAYVAGRRDAALLAAGPPTVEWLAGWGPLARLAAPSCVSVCLE
WWWYEVMILLCGLLPDPKPAVASMGVLMQTTALVYVFPSSLGFGVSTRVGNELGANRPGR
ARAAAHVAVAGATGMGLAAMSFAAGVRHAWGRMFTADADILRLTAAALPIVGLCELGNCP
QTVGCGVLRGSARPTRAAHVNLGAFYLVGMPVAVLLAFGLGVGFVGLWMGLLAAQVCCAG
LMLCVVGSTDWEAQARRAQELTSRSPADVERPGAHRSATAAGEGGRPEKGEQAGMERKCY
EPLISNSEETMPETV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaccaccacccccatgccaccggcgccgccgatggcgctggtcggcggcaagggc
ggccaccacgtctacgtcacggtgccccagcgcgcggaaggcgacgcggccggccattgc
ggccgccagctcaagtgccgagccgtgcccctgccggtggcaggggagaccgtccgggag
gcggcggcgctatgccggctcgcgttcccgatcgcgctgacggcgctgctgctctactcg
cggacggccctgtccatgctcttcctgggctccatcggcgacctcccgctggcggccggg
tccctcgccgtcgccttcgccaacatcaccggctactcggtgctgtctgggctctcgctc
ggcatggacccgctctgctcccaggcgttcggcgccaaccaggcgcgcctgctcggcctc
accctctaccgctccgtcctcttcctgctctgctgctcgctgccgctctccgcgctctgg
ctcaacatgtccaagatcctcgtcttcctggggcaggaccgcgagatcacggcgctggcc
caggagtacatcctcttctccctcccggacctcttctccttctccatcatccacccgctc
cgcgtgtacctccgatcccaggggatcacgcgcccgctagccgccgcggccgccgccgcc
gtcctgttccacgtgccggcgaactacgtgctggtggggcgtctcgggctcggcgcgccc
ggcgtggccgccgcggcgtcggcgtccaacttcgtgctcctcggcgtgctgctcgcgtac
gtcgccggccggcgcgacgcggcgctgctcgcggcggggccgcccacggtggagtggctc
gccgggtggggccctctcgcgcggctggccgcgccgagctgcgtgtcggtgtgcctggag
tggtggtggtacgaggtgatgatcctgctgtgcggcctcctgccggacccgaagccggcg
gtggcgtccatgggcgtgctgatgcagacgacggcgctggtgtacgtgttcccctcgtcg
ctgggtttcggcgtgtccacgcgggtgggcaacgagctgggcgccaaccgcccgggccgc
gcgcgcgcggcggcgcacgtcgccgtggccggcgcgacgggcatggggctcgcggccatg
tcgttcgcggccggggtgcgccacgcgtgggggcgcatgttcaccgccgacgccgacatc
ctccggctgaccgccgccgcgctcccgatcgtggggctctgcgagctcggcaactgcccg
cagaccgtcggctgcggcgtgctccgcggcagcgcgcggccgacgcgcgccgcgcacgtc
aacctcggcgccttctacctggtgggcatgcccgtggccgtgctcctggcgttcgggctc
ggcgtgggcttcgtcgggctctggatgggcctcctggcggcgcaggtgtgctgcgccggg
ctcatgctctgcgtcgtcggctccaccgactgggaggcgcaggcgcggcgggcgcaggag
ctgacgtcacgctcgccggccgacgtggagaggcccggggcccacaggtcagcgacggcc
gcgggagagggaggcaggccggagaagggggagcaggcaggcatggagcggaagtgctac
gagccattgatctccaacagtgaggagaccatgcctgaaactgtgtag
DBGET
integrated database retrieval system
