Panicum virgatum (switchgrass): 120671624
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Entry
120671624 CDS
T07260
Name
(RefSeq) serine/arginine-rich splicing factor RSZ21A-like
KO
K12896
serine/arginine-rich splicing factor 7
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120671624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120671624
Spliceosome [BR:
pvir03041
]
Common components
Common spliceosomal components
SR proteins
120671624
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
120671624
NCBI-ProteinID:
XP_039807947
LinkDB
All DBs
Position
4N:7055226..7058824
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AA seq
182 aa
AA seq
DB search
MARLYVGNLDPRVTARELEDEFRTFGVLRSVWVARKPPGFAFIDFDDKRDAEDAIRDLDG
KNGWRVELSRSASSGRGGRDRYGGSESKCYECGETGHFARECRLRIGSGGLGSGRRRSRS
RSRSRSPRYRRSPSYGRRSYSPATRSPRRRSVSPAPARGRSYSRSPHRARETSPNGYRRS
RS
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcttgtacgtcgggaacctggatcctcgggtgacggcacgggagctcgaggac
gagttccgcacctttggagttcttcggagtgtttgggttgctcggaaaccacctggcttt
gcatttattgattttgatgacaagagggatgctgaggatgcaatccgtgatcttgatggc
aagaatggatggagagttgagctatcacgtagtgccagcagtggtcgtggtggtcgtgat
cggtatggtgggtctgagtctaagtgctacgagtgtggtgagactgggcactttgctcgt
gagtgtcgtttgaggattggttctggaggtctaggcagtggaaggcgccgaagcaggagc
cgcagccgcagccgcagccccagataccgacggagtccaagttatggaagaagaagctac
agtcctgcaacacgctctccaaggcgtcgtagcgtgtcaccagccccagctcgtggacgc
agctatagcaggtcaccacaccgtgcacgggagacgtctcctaacggataccgccgcagc
aggagctag
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