KEGG   Panicum virgatum (switchgrass): 120671635
Entry
120671635         CDS       T07260                                 
Name
(RefSeq) tubulin beta-1 chain
  KO
K07375  tubulin beta
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04145  Phagosome
pvir04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120671635
  09142 Cell motility
   04814 Motor proteins
    120671635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pvir03036]
    120671635
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pvir04812]
    120671635
   04147 Exosome [BR:pvir04147]
    120671635
Chromosome and associated proteins [BR:pvir03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     120671635
Cytoskeleton proteins [BR:pvir04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    120671635
Exosome [BR:pvir04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   120671635
  Exosomal proteins of colorectal cancer cells
   120671635
  Exosomal proteins of bladder cancer cells
   120671635
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 120671635
NCBI-ProteinID: XP_039807962
LinkDB
Position
4N:complement(45674059..45676701)
AA seq 445 aa
MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYAGDSDLQLERINVYYNEASGGRFV
PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM
CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKG
LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA
EYQQYQDATAEDEEEYEEEEEEVAA
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagggagatcctgcacatccagggcggccagtgtggcaaccagatcggggccaagttc
tgggaggtgatctgcgacgagcacggcatcgaccacaccggcaagtacgcgggcgactcc
gacctccagctcgagcgcatcaacgtctactacaacgaggccagcggcggccggttcgtc
ccgcgcgccgtgctcatggacctcgagcctggcaccatggactcggtgcgctcggggccc
tacggccagatcttccgccccgacaacttcgtcttcggccagtccggcgccgggaacaac
tgggccaagggccactacaccgagggcgcggagctcatcgactcggtgctcgacgtcgtc
cgcaaggaggccgagaactgcgactgcctccaagggttccaggtctgccactcgctgggt
ggaggcactggctcaggaatgggcaccctgctcatctccaagatcagggaggagtacccg
gaccggatgatgctgacgttctctgtcttcccatcgcctaaagtgtctgatactgtggtg
gagccctacaacgccactctctccgtgcaccagcttgttgagaacgcggatgagtgcatg
gtgctcgacaatgaggctctctatgacatctgcttccgcaccctgaagcttgcaacacca
acctttggtgatctcaaccaccttatctccgcaaccatgagtggtgtcacatgctgcctg
cgcttccctggtcagctgaattctgatctccggaagcttgcagtcaacctgatccccttc
ccacgcctccacttcttcatggtcggattcgctccactgacttcaagaggctcacagcag
taccgtgccctcacggtgcccgagctgacccagcagatgtgggactccaagaacatgatg
tgtgctgctgaccctcgccacggccgctacctcaccgcatccgccatgttccgtgggaag
atgagcacaaaggaagtcgacgagcagatgctcaacgtgcagaacaagaactcatcgtac
tttgtggagtggatccccaacaatgtcaagtctagcgtgtgcgacatcccacccaagggc
ctgaagatggcatccacattcatcggcaactcgacatccatccaggagatgttccgccgc
gtgagtgagcagttcacggccatgttcaggaggaaggccttcttgcactggtacacgggt
gagggcatggatgagatggaattcaccgaggctgagagcaacatgaacgatctggtggct
gagtaccagcagtaccaggatgccacggcggaggacgaagaggagtatgaggaggaggaa
gaagaggttgctgcctaa

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