Panicum virgatum (switchgrass): 120671849
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Entry
120671849 CDS
T07260
Name
(RefSeq) importin subunit alpha-1b-like isoform X1
KO
K15042
importin subunit alpha-6/7
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120671849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120671849
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120671849
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
HEAT_EZ
HEAT_2
HEAT
ARM_ARMC5
TMCO6
ARMC6
ZER1-like_2nd
IBB
SIL1_FES1_HPBP1_C
ARM_PUB
TPR_TRIP12_N
TPR_CCP1_N
Motif
Other DBs
NCBI-GeneID:
120671849
NCBI-ProteinID:
XP_039808038
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All DBs
Position
5N:complement(22949583..22957693)
Genome browser
AA seq
375 aa
AA seq
DB search
MSLRPSEQAAHRRSSFKASVSAADWWRRRVSCMDGIRKEVRSSALRRKRCGGSEAAPLAH
PAALGKTLANLPQLVAGLYSDDSRAQFEADREFRKMLSIDRDPPIQEVVNCGVLPCLVRL
LSREDYPELQFEATWALTNIASGTSEHTMLVVNTGAIPSFVKLFSSPNEDVCEQAVWALG
NVAGDSAECRDVVLAHGALFPLLQLFNENPRASLLRNGTWCLSNLCRGKPNFQHVKPALL
VLRQLIHSEDEDVLSDACWALSYLSLGGDNTNVQAVIETGACPRLVELLSIASGDQAHTQ
CIVDHQALPYLLNLLVTNQKKSVKKEACWTISNITAGNREQIQAVINGNLIGPLVHLMRT
AECAVRDEAACVRIS
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgcggccgagcgagcaggcggcgcaccgccggagcagcttcaaggcgtcggtg
agcgcggccgactggtggcggcggcgcgtcagctgcatggacggcatccgcaaggaggtc
cgcagcagcgccctccggaggaagcgctgcgggggctccgaggcggcgccgctcgcgcac
ccggcggcgctcgggaagacgctggcgaacctgccgcagttggtggcggggttgtactcg
gatgacagcagagcgcagtttgaggcggacagggagttcaggaaaatgctctcgatcgat
cgggaccccccaattcaggaggtggttaactgtggagttttgccttgcttggtacggttg
ctttccagggaggactaccctgagctccagtttgaggccacatgggctctcactaacatt
gcctctggaacttccgagcacaccatgctggttgttaatactggtgccatacccagcttt
gtgaagctcttcagctcaccaaatgaagatgtctgtgaacaggctgtgtgggccctggga
aacgtggctggtgactctgcagaatgccgtgacgttgtgcttgcacatggcgctctcttt
ccactacttcagctgtttaatgagaaccccagagcctcattgctgaggaatggtacctgg
tgcctcagtaacctttgccgtggaaaacccaactttcaacatgtgaagccagcactccta
gttttgcgacagctcattcactctgaagacgaggatgtccttagtgatgcctgctgggca
ctctcttacttgtctcttgggggtgacaataccaatgtccaagctgtgattgaaactgga
gcatgccctagacttgttgagctccttagcattgcctcaggggatcaagctcatactcag
tgcattgttgatcatcaagcacttccctaccttttaaatcttctggtaacaaatcaaaag
aaaagcgtcaaaaaagaagcttgctggacaatctccaacatcacagctggaaaccgggag
cagattcaggctgtgatcaacgggaacctaattggtcctttggtgcatctgatgcgtact
gctgagtgtgctgtcagagatgaggctgcttgtgttaggattagttga
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