Panicum virgatum (switchgrass): 120671927
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Entry
120671927 CDS
T07260
Name
(RefSeq) conserved oligomeric Golgi complex subunit 1-like
KO
K20288
conserved oligomeric Golgi complex subunit 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120671927
Membrane trafficking [BR:
pvir04131
]
Endosome - Golgi transport
Tethering complex
Conserved oligomeric Golgi (COG) complex
120671927
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Motif
Pfam:
VPS51_Exo84_N
Sec5
EXOC6_Sec15_N
Insc_C
Motif
Other DBs
NCBI-GeneID:
120671927
NCBI-ProteinID:
XP_039808123
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All DBs
Position
5N:59247604..59254294
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AA seq
1077 aa
AA seq
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MPAAAVQGGGGGGGGAADAEELFRTKRIPEIRAAEGATRREISAKEEELRQLVGRSYRDL
LDSADSILLIKQSSDSISDNLSRISGSLSSLSPPPEPSPAASAASPSPSAGGRARLYALA
ARAKYLVDTPEHIWGRLDEGLLLEAAGRYLRAQVVHGRLSRDATAAARFPLLTHQAQLVE
AFRPQIAQRARERLADRRLPVAAHADALAAVAAIDAPSLAPPQALLLFLTSRRAWITQAL
TGLASDLSSYTSVLCDVARIVRITLGHVGQLFLPALSDMPLFFKTVLEKTPPEQLFGGLP
DPDEEARLWKEHMNQLEATMVLLEPDAVAQACTDWLKECCAETFGVIAGGQKLVDAIESG
ELLGSVQRLVRDALDGRDGLEGSLEQWLKSVFGSEIESPWDQIRGLILKDSKDIFEDWME
EAFVRRMKDILHSELDSLGASVNVKESIDSIGANFDPKDVGDFLAYLQKSSKGGGFWFSE
SKIKKGGVLAHLKPIADENDFHSCLTSYFGPEVSRIRNAIDSKCKSILDDLLSFVESHNA
APRLKELVPYLQEKCYRTISGVLKELEAELRKLSALLGTKKEDNDIPAASVIAERALFIG
RLLFALRYHSSHVPLILGSPREWVKEAGGAAFARLSSPTPRHSRASFDSSMSFTPRRRTF
DSPRSPGMQISDSPRKQTIAAAVSLFGADDRSNPRLDELYKTLQSLCIMAHSVWISWVST
ELSHILSYDLNKDDSLSSSTPLRGWEVTIIKQEETAEGSLEMKIALPSMPSLYIISFLYQ
ACLEIHKVGGHILDRIILHNFAWELLQKVINIYETFLVSIESGNSRVSEKGVLQILLDLR
FIGDVLSGGKSSSSNTTETQTKQDSLPSTITKSSFRRKQSQSHADPAAIEPINKLISKLS
HRLDPIDWATYEPYLWENEKQSYKRYVVLFGFLVQLNHLYTGTVQKLPTKSNTDSNIMRC
SQVPRFKYLPISAPAISSRPHKSSLQSPSGDNASKGPWKSYSNGDRSTTPEFDDNASLGA
APLLKSFVTQVGSKFGENTSRWGSMLSDGQVGKLSDILPGPAAGFFSSFTSGVRYDS
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcggcggccgtccaaggcggcggcggcggcggcggcggcgcggccgacgccgag
gagctgttccgcaccaagcgcataccggagatccgcgcggcggagggcgccacccgccgc
gagatctccgccaaggaggaggagctccggcagctcgtcggccgcagctaccgcgacctg
ctcgactccgcggactccatcctcctcatcaagcagtcctccgactccatctccgacaac
ctctcccgtatctccggctccctctcgtcgctctcgccgccgcccgagccctccccggcc
gcgagcgccgcctcgccgtccccgtccgctggcgggcgcgcgaggctctacgcgcttgcc
gcgcgcgccaagtacctggtcgacacgcccgagcacatctggggccggctcgacgagggc
ctcctcctggaggcggcggggcggtacctgcgggctcaggtcgtgcacgggcggctctcc
cgcgacgccacggccgccgcgcggttcccgctcctcacgcaccaggcgcagctcgtggag
gcgttccggccgcagatcgcccagcgcgcgcgcgagcgcctcgccgaccgccgcctcccc
gtagcggcccacgctgacgcgctcgcggccgtggctgcgatcgacgcgccgtcgctcgcc
ccgccccaggcgctccttctcttccttacctcgcgccgcgcgtggatcacccaagcccta
acggggctcgcctcggatctgtcatcgtacacctccgtgctgtgcgatgtcgcgaggatc
gtgcgtatcacgcttggccacgttgggcagttgtttttgcctgcgctcagtgatatgccg
ctgttcttcaagactgtgctcgagaagacgccacctgagcagctattcggcggcctccca
gaccctgatgaggaagcacggctgtggaaggagcacatgaaccagcttgaagctacaatg
gtgctgcttgagccagatgctgtagcacaggcctgtacagattggctcaaggaatgttgt
gctgaaacttttggtgtcattgctgggggccaaaagttggttgatgccattgagagtggg
gagctacttggatcagtgcaaaggcttgtgcgtgatgcgctagatgggagggatgggttg
gaggggagtttggaacagtggctgaagagcgtctttgggtcagaaattgaatcgccatgg
gatcagatccgtggattgattttgaaggacagcaaggatatttttgaggattggatggag
gaagcatttgtgcggcggatgaaggatattttgcattcagagcttgatagtttgggtgca
agtgttaatgtgaaggaatcaattgattctattggtgccaattttgatccaaaggatgtt
ggagatttccttgcatacctgcagaagtcgtcaaagggcggtggtttctggttctcagag
tctaagatcaagaaaggaggagttttggcacacttgaaaccaattgctgatgagaatgat
ttccatagctgcctaacctcatattttgggccagaagttagtcggatcaggaatgcaatt
gacagcaaatgcaagagtattctggatgatctgttaagctttgtggagtcacataatgca
gccccaagactaaaggaattagtgccatacctccaggagaaatgctataggaccatctcg
ggagtactgaaagaattagaagctgagcttagaaagctctctgctttgttggggaccaaa
aaggaggataatgacatacctgcagcatctgttatagcggagagggctctattcattggt
cgtctgttgtttgcgctgagataccactcaagccatgtacccctgatattaggctctcca
agggagtgggtgaaggaggctggtggtgcagcattcgccaggttgtcatcacctactcca
agacactctagggcatcttttgattcttcaatgtcttttacccccagaagacgcacattt
gacagccctaggagtcctggaatgcaaatatcggatagccccaggaaacaaactattgct
gccgctgtatctttatttggtgctgatgatagatccaaccctagactcgatgaactttac
aagaccctgcagtcgctttgcatcatggctcatagtgtatggatatcttgggtgtccact
gaattatctcatattctttcatatgatctcaataaagatgattcactatcctcttcaact
cctttgaggggttgggaagtcacaatcatcaaacaagaggaaacagcggagggctccttg
gagatgaaaatagctcttccatcaatgccttcattgtatatcatttcctttctttatcaa
gcatgtttggagattcataaagttggagggcacatcctggacagaattatcttgcataat
tttgcatgggagctactacagaaggtcattaatatttatgaaacattccttgtatctatt
gaatcggggaattctcgagtttctgagaaaggagttctgcaaatactgctagacctgcgt
ttcattggtgatgtcctatcaggaggcaaaagttcttccagcaacactactgaaacacag
acaaaacaggattctttaccaagcaccatcaccaagtcttccttcaggagaaaacagtca
caatcacatgcagacccagctgccatagagccgataaacaagttaatcagtaagctctcg
catagattggatccaatagactgggccacgtatgaaccttacctctgggagaacgagaag
caatcttacaagcgttatgttgttctttttggttttttggtccaattgaatcacttgtac
actggtactgtacaaaagttaccaacaaagtcaaatacagattcaaatatcatgaggtgc
tctcaggttccaagattcaagtacctaccgatcagtgccccagctatatcatcaagacca
cacaaatcatcactacagtcaccatctggtgacaatgcctcgaaaggtccttggaaatca
tattcaaatggtgatagatctaccacaccagaatttgatgataatgctagtcttggtgct
gctccattgcttaaatcatttgttactcaggtcgggagcaaatttggggagaacacatcc
agatgggggtccatgctctctgatggccaggtcggtaagctaagtgacattcttccggga
ccagcagctgggtttttctcttctttcacatcgggagttcgatatgattcatag
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