Panicum virgatum (switchgrass): 120671955
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Entry
120671955 CDS
T07260
Name
(RefSeq) formate--tetrahydrofolate ligase
KO
K01938
formate--tetrahydrofolate ligase [EC:
6.3.4.3
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00670
One carbon pool by folate
pvir01100
Metabolic pathways
pvir01200
Carbon metabolism
pvir01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
120671955
Enzymes [BR:
pvir01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.3 formate---tetrahydrofolate ligase
120671955
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Motif
Pfam:
FTHFS
CbiA
Motif
Other DBs
NCBI-GeneID:
120671955
NCBI-ProteinID:
XP_039808166
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Position
5N:complement(8468460..8471705)
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AA seq
635 aa
AA seq
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MPSLTIRRLDVASPVPADIDIANSVEPLPIVDIAAELGLGPEHYDLYGKYKAKVLLSVLD
DLKAQQDGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIK
GGAAGGGYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTRIFHENSQSDKALFNRLCP
ANKEGKRRFANVMLKRLTKLGISKTDPNELTPDEVRRFARLDIDPESITWRRVMDVNDRF
LRKITIGQGPEEKGMVRETGFDISVASEIMAVLALTTSLADMRERLGRMVIGNSKSGEPI
TADDLGVGGALTVLMKDAIHPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVG
KGGFVVTEAGFGADIGTEKFMDIKCRYSGLVPQCAIIVATIRALKMHGGGPDVVAGKPLD
HAYVSENVALVEAGCINLAKHIANTRSYGVNVVVAINKFASDTEAEMNAVRNASMVAGAF
DAVVCTHHAHGGKGAVELGLAVQRACESQSEPLKFLYPLESSIKEKIESIAKFYGASGVE
YSEQAEKQIEMYTKQGFSNLPICMAKTQYSFSHVPSMKGAPTGFVLPIRDVRASIGAGFI
YPLVGTMSTMPGLPTRPCFYEIDVDTATGKVMGLS
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcctgacgatccggaggctggacgtggcatcgccggtgccggcggacatcgac
atcgccaattctgtcgagccgctcccgatcgttgacatcgcggcagagctcggcctcggg
cccgagcactacgacctctacggcaagtacaaggccaaggtgttgctgtcggttcttgat
gacctcaaggcgcagcaggacgggtactacgtcgtagtgggtggcatcacgccgacgccg
ctcggggagggcaagtctaccaccaccgtcggcctgtgtcaggctctgggcgcgttcctt
gacaaaaaggttgtcacttgccttcgtcaaccatcgcaagggcctacctttggaatcaag
ggaggtgcagctggaggtggctacagccaagttatacccatggatgagttcaaccttcat
ctgacaggcgatatccatgcaattacagctgcaaacaatctcttggctgctgctattgat
acaaggatcttccatgaaaattctcagtcagataaggcactgttcaacagattatgtcca
gcaaacaaagaaggcaagaggcgctttgctaacgtaatgctcaaacgtctgacaaagctt
ggcatttcgaagacagatcccaatgagcttacaccagatgaagttagacgttttgcaagg
cttgacattgaccctgagtccattacatggcgacgggtgatggatgtcaacgatcgtttc
ctgaggaaaatcactattggacagggccctgaagaaaaaggaatggtgagagaaacaggc
tttgacatatcagtggctagtgagataatggctgtgttagctcttacaacttcccttgcc
gacatgagagaaaggcttggaagaatggtgatagggaacagcaagtcaggagagccaatt
actgctgatgatcttggtgttggaggtgccttaactgtcctaatgaaagatgcaattcat
cccaccctcatgcaaactcttgaaggcacaccagttttggtacatgctggaccatttgct
aacattgctcatggaaactcctcgatagttgctgataagatagctttaaagttggttggg
aagggtggttttgttgttactgaggcaggttttggtgctgatattggaactgagaagttc
atggatataaagtgtagatacagtggattggtaccacagtgtgctattattgtggccaca
attagagctcttaaaatgcatggtggggggccagatgttgtggccgggaagcctctggat
catgcatatgtgagtgaaaatgtggcccttgttgaagctggatgtatcaaccttgctaaa
catatagcaaacacaaggagttatggagttaatgttgtagtcgcaatcaacaaatttgca
tcagatactgaagcagaaatgaacgcagtgcggaatgcatctatggttgctggagccttt
gatgctgtcgtctgcacacaccatgcccatggtggtaaaggagcggttgaacttggactc
gcagttcaacgagcatgtgaaagccaatcagagcctctgaagtttctgtatcctttggaa
tctagcataaaggagaagattgaatccatagctaagttctatggtgctagtggtgtcgaa
tattctgaacaggctgagaagcagattgagatgtacaccaagcaaggcttctccaacctc
ccaatctgcatggcaaaaacccagtactcattctcacatgttccctccatgaagggcgcc
ccaaccggctttgttctaccgataagggacgtgagggccagcatcggagctgggttcatc
tacccgctcgtgggcaccatgagcacaatgcccggccttcccacaaggccctgcttttat
gagatcgacgtcgacactgccaccgggaaggtcatgggcctgtcataa
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