Panicum virgatum (switchgrass): 120672005
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Entry
120672005 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120672005
KO
K15053
charged multivesicular body protein 7
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03272
Virion - Hepatitis viruses
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
120672005
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120672005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120672005
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120672005
Membrane trafficking [BR:
pvir04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
120672005
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120672005
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
IFP_35_N
ARM_TT21
7TMR-HDED
Motif
Other DBs
NCBI-GeneID:
120672005
NCBI-ProteinID:
XP_039808220
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Position
5N:complement(16023121..16026319)
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AA seq
419 aa
AA seq
DB search
MVPGEGEREEWEAAVRAEVGAAGWWDDPDSADLRARFKAFTGQRRDWPHPTLLFWKDLLL
RVARRLRRCSAPAHLVTNAWFARPGGLTPLCLPQVLEEMRADGDILLKSELIDPSTGSLY
QLVRRVSQMAISSRRPVSQEDILVFKSLVEERAADIARQLSDSHWTSACVVTISRFNSFF
CDQEDAHAALCILTQSGKARYLVARKQDPIEGVKFALNSAQVPAVSKFDHDTLHLVWTEE
RLQQQLDVLHRRCEISRRRALASFKSGDKQGAYHYVRQSKVFSQSRNRCTQLLERVEEVI
SLIASAESTKKVYEAIEIGIQAMKENNVSIEEVNVHLKEVDELVAAQREVDAALESVPLH
SIDDEGDIEEEFRKLEAELQDEIPHIQVQEPMPHPNEESPDEVVESLSNNLSSIKLEAI
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggttcccggcgagggggaacgggaggagtgggaggcggcggtgcgggcggaggtgggc
gcggccggctggtgggacgaccccgacagtgccgacctccgcgccaggttcaaggccttc
acggggcagcgccgcgactggccccaccccacgctcctcttctggaaggacctcctgctt
cgcgtcgcgcgccggctccgccgctgctccgcccccgcccacctcgtgacgaatgcttgg
ttcgcgcgtcccggggggctcacaccgctctgcttgccgcaagttctggaagagatgcgt
gcagatggggacatactgctcaaatccgagctgatcgatccgtccacagggagcctgtac
cagctggtcaggagggtgagccagatggccatcagctcgaggcggcctgtttcgcaggag
gacatcctcgtgttcaaatcgttggtcgaggaaagggctgcagatattgctaggcaattg
agtgactctcactggacatcggcatgtgttgttacgattagcagattcaatagcttcttc
tgcgatcaggaggatgcacatgccgcgttatgcattttgacgcaatctgggaaagctcgg
taccttgtagccaggaagcaggatcctattgagggtgtcaagtttgcactcaactcggca
caagttcctgctgtatccaagtttgaccatgacaccttgcacttagtttggacagaagag
aggctgcagcagcagcttgatgtgcttcatcgcagatgcgagatttcaagaagaagggca
ttggcatccttcaagtctggggacaaacagggtgcttatcattatgtgaggcagtctaag
gtattctcacaaagccggaacagatgcacgcagttgttagaaagagttgaagaagttatc
agcctgattgctagtgctgaatcaactaagaaggtctatgaggcaatagaaattggtatc
caggcaatgaaggagaacaatgtcagcattgaggaggttaatgtccatctgaaggaggtt
gatgagcttgttgctgcacaaagagaagttgatgctgccctggaatcagtaccactccat
tcgatagatgatgaaggcgatattgaggaagagttcaggaagcttgaagcagaattgcag
gatgagatccctcatattcaagttcaagaaccaatgccacatccaaacgaggaatcacct
gatgaagtcgttgaatcattgagcaataacttgtcaagcattaaactcgaggccatctaa
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