Entry |
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Name |
(RefSeq) DNA polymerase eta
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KO |
|
Organism |
pvir Panicum virgatum (switchgrass)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:pvir00001]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
120672011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:pvir03400]
120672011
Enzymes [BR:pvir01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
120672011
DNA repair and recombination proteins [BR:pvir03400]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
120672011
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
5N:57605574..57616831
|
AA seq |
634 aa
MPVARPESQEPRVIAHVDMDCFYVQVEQRRNPALRGQPTAVVQYNDWKGGGLIAVSYEAR
GFGVKRSMRGDEAKRVCPGINLVQVPVARGKADLNLYRSAGSEVVAILASKGKCERASID
EVYLDLTDAAKEMLLQAPPDSPEEILIEAAKSNILGLPSDASEKEKNVRAWLCRPDADYE
DKLLACGAIIVAQLRVRVLEETQFTCSAGIAHNKMLAKLVSGMHKPAQQTVVPSSSVQDF
LASIPVKKMKQLGGKLGSSLQDDLGVETIGDLLSFTEEKLQEQYGVNTGTWLWKIARGIS
GEEVEDRLLPKSHGCGKTFPGPKALKNSASVKGWLDQLCEELSERIQSDLNQNKRIAQTL
TLHARASKENERDSTKKFPSKSCPLRYGTGKIQEDAMKLFQSGLHDFLESQNTGWSITSL
SVTASKIYDIPSGTSSILRYIKGPSSAASPAIPDSSSVPEDPSLDNNVYGMPIHEEQCEP
SISEQEDGKRYSGISAKQCSANEEKRISKKLPEVKGTSSILKFLSRGQSALHEKRKSNEL
ICSHPGPGSSSEANRAEELNVPAQGADRSSTSSGAEPSGSNAWMFNVEDIDPAVVKELPP
EIQREIQGWTRPSKQPSTKRRGSTISSYFQPARS |
NT seq |
1905 nt +upstreamnt +downstreamnt
atgccggtggcaaggccggagtctcaggagccccgggtgatcgcccatgttgacatggac
tgcttctacgtccaagtggagcaacggaggaacccagcactcaggggccagccgaccgcc
gtggtgcagtacaacgactggaaaggcggcggtttgatcgctgtcagctacgaggctcgc
gggtttggtgtgaagaggtccatgcgtggagatgaggcaaagagggtctgtcctggtatt
aatctggttcaggtccctgtggcgcgtggcaaggccgaccttaatctctacagaagtgct
ggctctgaggttgttgcaatccttgcaagcaaagggaagtgtgagcgggcatccattgac
gaagtttatcttgaccttaccgatgccgcaaaggaaatgctcttacaagctcccccagat
tcaccagaggagattttaattgaggcagcaaagtcaaatatcttgggccttccttctgat
gccagtgagaaggaaaagaatgtgagggcatggctttgtcgaccggatgctgattacgag
gataagttattggcatgtggagctataattgttgcacagctacgagtcagagttctggag
gaaacccaattcacatgctctgctgggattgctcacaataagatgttagctaaacttgtc
agtggaatgcacaagcctgctcaacaaacagttgtcccttcttcatcagttcaagatttt
ctagcatcaatacctgtgaagaaaatgaaacagcttggtggtaagcttggaagttccttg
caggatgatcttggggtcgagaccattggtgatcttctaagttttacagaggaaaagtta
caagagcagtatggtgtaaatactggaacatggctatggaagattgctaggggcattagt
ggagaagaagttgaggatcgtcttctaccgaagagtcacggctgtggaaagacatttcct
ggaccaaaagcactgaagaacagcgcttctgtcaaaggctggctggatcaactttgtgag
gaattaagtgaacggattcagtctgacctgaaccagaacaagagaattgctcaaacactc
actcttcacgccagagcgtctaaggaaaatgaacgtgattcaacgaagaaattcccttct
aaatcctgtccattgcgctatgggactgggaaaattcaagaggatgcaatgaagctattt
caatctggccttcacgattttttagaatctcaaaacactggatggagcataacatctctt
tcagttactgcaagcaaaatatatgatataccaagtggaacaagctcaatcttgagatac
attaaaggtcctagttctgctgcatctccggctatacctgattcttcatctgtaccggag
gatccatccctcgataacaatgtatatgggatgccaattcatgaagaacaatgcgagcca
tctatctcagagcaagaagacggtaaaagatattcagggatttcagccaaacaatgttca
gcgaatgaagaaaaaagaatctcaaagaagttgcctgaagttaagggaacttcctcgata
ttgaagtttctttcacggggtcaatctgccctccatgagaaaagaaaatccaatgaactg
atttgcagtcatccaggtccagggagttcctcggaagcaaacagagctgaagagctcaat
gtgcctgcacaaggtgcagatagaagcagcaccagcagtggtgctgaaccctctggcagt
aacgcatggatgttcaacgttgaagatatcgatccagcagtagtgaaggagctgccgcca
gagatccagagagaaatacaggggtggacccgtccatcgaagcagccgagcaccaagcga
cggggttctaccatttcttcgtacttccagcccgcaaggtcttag |