KEGG   Panicum virgatum (switchgrass): 120672011
Entry
120672011         CDS       T07260                                 
Name
(RefSeq) DNA polymerase eta
  KO
K03509  DNA polymerase eta [EC:2.7.7.7]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    120672011
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pvir03400]
    120672011
Enzymes [BR:pvir01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     120672011
DNA repair and recombination proteins [BR:pvir03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    120672011
SSDB
Motif
Pfam: IMS POLH-Rev1_HhH IMS_C IMS_HHH_1 UBM IMS_HHH
Other DBs
NCBI-GeneID: 120672011
NCBI-ProteinID: XP_039808223
LinkDB
Position
5N:57605574..57616831
AA seq 634 aa
MPVARPESQEPRVIAHVDMDCFYVQVEQRRNPALRGQPTAVVQYNDWKGGGLIAVSYEAR
GFGVKRSMRGDEAKRVCPGINLVQVPVARGKADLNLYRSAGSEVVAILASKGKCERASID
EVYLDLTDAAKEMLLQAPPDSPEEILIEAAKSNILGLPSDASEKEKNVRAWLCRPDADYE
DKLLACGAIIVAQLRVRVLEETQFTCSAGIAHNKMLAKLVSGMHKPAQQTVVPSSSVQDF
LASIPVKKMKQLGGKLGSSLQDDLGVETIGDLLSFTEEKLQEQYGVNTGTWLWKIARGIS
GEEVEDRLLPKSHGCGKTFPGPKALKNSASVKGWLDQLCEELSERIQSDLNQNKRIAQTL
TLHARASKENERDSTKKFPSKSCPLRYGTGKIQEDAMKLFQSGLHDFLESQNTGWSITSL
SVTASKIYDIPSGTSSILRYIKGPSSAASPAIPDSSSVPEDPSLDNNVYGMPIHEEQCEP
SISEQEDGKRYSGISAKQCSANEEKRISKKLPEVKGTSSILKFLSRGQSALHEKRKSNEL
ICSHPGPGSSSEANRAEELNVPAQGADRSSTSSGAEPSGSNAWMFNVEDIDPAVVKELPP
EIQREIQGWTRPSKQPSTKRRGSTISSYFQPARS
NT seq 1905 nt   +upstreamnt  +downstreamnt
atgccggtggcaaggccggagtctcaggagccccgggtgatcgcccatgttgacatggac
tgcttctacgtccaagtggagcaacggaggaacccagcactcaggggccagccgaccgcc
gtggtgcagtacaacgactggaaaggcggcggtttgatcgctgtcagctacgaggctcgc
gggtttggtgtgaagaggtccatgcgtggagatgaggcaaagagggtctgtcctggtatt
aatctggttcaggtccctgtggcgcgtggcaaggccgaccttaatctctacagaagtgct
ggctctgaggttgttgcaatccttgcaagcaaagggaagtgtgagcgggcatccattgac
gaagtttatcttgaccttaccgatgccgcaaaggaaatgctcttacaagctcccccagat
tcaccagaggagattttaattgaggcagcaaagtcaaatatcttgggccttccttctgat
gccagtgagaaggaaaagaatgtgagggcatggctttgtcgaccggatgctgattacgag
gataagttattggcatgtggagctataattgttgcacagctacgagtcagagttctggag
gaaacccaattcacatgctctgctgggattgctcacaataagatgttagctaaacttgtc
agtggaatgcacaagcctgctcaacaaacagttgtcccttcttcatcagttcaagatttt
ctagcatcaatacctgtgaagaaaatgaaacagcttggtggtaagcttggaagttccttg
caggatgatcttggggtcgagaccattggtgatcttctaagttttacagaggaaaagtta
caagagcagtatggtgtaaatactggaacatggctatggaagattgctaggggcattagt
ggagaagaagttgaggatcgtcttctaccgaagagtcacggctgtggaaagacatttcct
ggaccaaaagcactgaagaacagcgcttctgtcaaaggctggctggatcaactttgtgag
gaattaagtgaacggattcagtctgacctgaaccagaacaagagaattgctcaaacactc
actcttcacgccagagcgtctaaggaaaatgaacgtgattcaacgaagaaattcccttct
aaatcctgtccattgcgctatgggactgggaaaattcaagaggatgcaatgaagctattt
caatctggccttcacgattttttagaatctcaaaacactggatggagcataacatctctt
tcagttactgcaagcaaaatatatgatataccaagtggaacaagctcaatcttgagatac
attaaaggtcctagttctgctgcatctccggctatacctgattcttcatctgtaccggag
gatccatccctcgataacaatgtatatgggatgccaattcatgaagaacaatgcgagcca
tctatctcagagcaagaagacggtaaaagatattcagggatttcagccaaacaatgttca
gcgaatgaagaaaaaagaatctcaaagaagttgcctgaagttaagggaacttcctcgata
ttgaagtttctttcacggggtcaatctgccctccatgagaaaagaaaatccaatgaactg
atttgcagtcatccaggtccagggagttcctcggaagcaaacagagctgaagagctcaat
gtgcctgcacaaggtgcagatagaagcagcaccagcagtggtgctgaaccctctggcagt
aacgcatggatgttcaacgttgaagatatcgatccagcagtagtgaaggagctgccgcca
gagatccagagagaaatacaggggtggacccgtccatcgaagcagccgagcaccaagcga
cggggttctaccatttcttcgtacttccagcccgcaaggtcttag

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