Panicum virgatum (switchgrass): 120672011
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Entry
120672011 CDS
T07260
Name
(RefSeq) DNA polymerase eta
KO
K03509
DNA polymerase eta [EC:
2.7.7.7
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
120672011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvir03400
]
120672011
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
120672011
DNA repair and recombination proteins [BR:
pvir03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
120672011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
POLH-Rev1_HhH
IMS_C
IMS_HHH_1
UBM
IMS_HHH
Motif
Other DBs
NCBI-GeneID:
120672011
NCBI-ProteinID:
XP_039808223
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Position
5N:57605574..57616831
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AA seq
634 aa
AA seq
DB search
MPVARPESQEPRVIAHVDMDCFYVQVEQRRNPALRGQPTAVVQYNDWKGGGLIAVSYEAR
GFGVKRSMRGDEAKRVCPGINLVQVPVARGKADLNLYRSAGSEVVAILASKGKCERASID
EVYLDLTDAAKEMLLQAPPDSPEEILIEAAKSNILGLPSDASEKEKNVRAWLCRPDADYE
DKLLACGAIIVAQLRVRVLEETQFTCSAGIAHNKMLAKLVSGMHKPAQQTVVPSSSVQDF
LASIPVKKMKQLGGKLGSSLQDDLGVETIGDLLSFTEEKLQEQYGVNTGTWLWKIARGIS
GEEVEDRLLPKSHGCGKTFPGPKALKNSASVKGWLDQLCEELSERIQSDLNQNKRIAQTL
TLHARASKENERDSTKKFPSKSCPLRYGTGKIQEDAMKLFQSGLHDFLESQNTGWSITSL
SVTASKIYDIPSGTSSILRYIKGPSSAASPAIPDSSSVPEDPSLDNNVYGMPIHEEQCEP
SISEQEDGKRYSGISAKQCSANEEKRISKKLPEVKGTSSILKFLSRGQSALHEKRKSNEL
ICSHPGPGSSSEANRAEELNVPAQGADRSSTSSGAEPSGSNAWMFNVEDIDPAVVKELPP
EIQREIQGWTRPSKQPSTKRRGSTISSYFQPARS
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgccggtggcaaggccggagtctcaggagccccgggtgatcgcccatgttgacatggac
tgcttctacgtccaagtggagcaacggaggaacccagcactcaggggccagccgaccgcc
gtggtgcagtacaacgactggaaaggcggcggtttgatcgctgtcagctacgaggctcgc
gggtttggtgtgaagaggtccatgcgtggagatgaggcaaagagggtctgtcctggtatt
aatctggttcaggtccctgtggcgcgtggcaaggccgaccttaatctctacagaagtgct
ggctctgaggttgttgcaatccttgcaagcaaagggaagtgtgagcgggcatccattgac
gaagtttatcttgaccttaccgatgccgcaaaggaaatgctcttacaagctcccccagat
tcaccagaggagattttaattgaggcagcaaagtcaaatatcttgggccttccttctgat
gccagtgagaaggaaaagaatgtgagggcatggctttgtcgaccggatgctgattacgag
gataagttattggcatgtggagctataattgttgcacagctacgagtcagagttctggag
gaaacccaattcacatgctctgctgggattgctcacaataagatgttagctaaacttgtc
agtggaatgcacaagcctgctcaacaaacagttgtcccttcttcatcagttcaagatttt
ctagcatcaatacctgtgaagaaaatgaaacagcttggtggtaagcttggaagttccttg
caggatgatcttggggtcgagaccattggtgatcttctaagttttacagaggaaaagtta
caagagcagtatggtgtaaatactggaacatggctatggaagattgctaggggcattagt
ggagaagaagttgaggatcgtcttctaccgaagagtcacggctgtggaaagacatttcct
ggaccaaaagcactgaagaacagcgcttctgtcaaaggctggctggatcaactttgtgag
gaattaagtgaacggattcagtctgacctgaaccagaacaagagaattgctcaaacactc
actcttcacgccagagcgtctaaggaaaatgaacgtgattcaacgaagaaattcccttct
aaatcctgtccattgcgctatgggactgggaaaattcaagaggatgcaatgaagctattt
caatctggccttcacgattttttagaatctcaaaacactggatggagcataacatctctt
tcagttactgcaagcaaaatatatgatataccaagtggaacaagctcaatcttgagatac
attaaaggtcctagttctgctgcatctccggctatacctgattcttcatctgtaccggag
gatccatccctcgataacaatgtatatgggatgccaattcatgaagaacaatgcgagcca
tctatctcagagcaagaagacggtaaaagatattcagggatttcagccaaacaatgttca
gcgaatgaagaaaaaagaatctcaaagaagttgcctgaagttaagggaacttcctcgata
ttgaagtttctttcacggggtcaatctgccctccatgagaaaagaaaatccaatgaactg
atttgcagtcatccaggtccagggagttcctcggaagcaaacagagctgaagagctcaat
gtgcctgcacaaggtgcagatagaagcagcaccagcagtggtgctgaaccctctggcagt
aacgcatggatgttcaacgttgaagatatcgatccagcagtagtgaaggagctgccgcca
gagatccagagagaaatacaggggtggacccgtccatcgaagcagccgagcaccaagcga
cggggttctaccatttcttcgtacttccagcccgcaaggtcttag
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