KEGG   Panicum virgatum (switchgrass): 120672018
Entry
120672018         CDS       T07260                                 
Name
(RefSeq) 5' exonuclease Apollo-like isoform X1
  KO
K15340  DNA cross-link repair 1A protein
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pvir03400]
    120672018
DNA repair and recombination proteins [BR:pvir03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Nucleases
    120672018
SSDB
Motif
Pfam: DRMBL Lactamase_B_2 Polyhedrin
Other DBs
NCBI-GeneID: 120672018
NCBI-ProteinID: XP_039808234
LinkDB
Position
5N:66028179..66031323
AA seq 627 aa
MPIDMPRGLPFAVDTWGPSSRHRRHRFLTHAHRDHLVGAGAAAADGSGGTVYATRLTLAL
ALRHFPQLESWVFVDMEVGRTVAVDDPAGSFAVTAYDANHCPGAVMFLFEGQFGTILHTG
DCRLTSDCVQNLPMKYIVKKGKENICRLDFVFLDCTFSKCFLKLPSKESAIQQVIACIWK
HPHAPYVYLACDLLGHEDILVEVSRTFGLKIYVDQKLDCFKALSLTAPEIITDDPSSRFQ
IVGFHQLYDTASRKLEEARASLLPEPLFIRPSTQWYAICARSQKPSLTEAEQDEFGVWHI
CFSIHSSRDELEQALQLLQPQWVISTTPPCFAIELSYVKKHCFKTRLKADDPLWKIVRDP
LQKSVSSPCSVLASETHRDKDHSDFVDGDDHSLSSSEECTYLNVRTLELKFVPSPPPDEP
EITLFGRARFGSQAIDIMKEELCNQYITFEEGCLEEARACAPVDSVHGNSEDVETNSATG
CVKDAPTSHHDHMEAGDEVGSCQHEAYLKQSEAFQAQSLPTIQRNILVLADEHGKFEAAK
ESKSSSFSEDSSLSIVRSGETTTCEKEPLCIIGSSKCLNPSLKRLYRSRNIPVPRPLPSL
VRLLESSKRVKMQPSTCSSLNSRHSLP
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgccgatagacatgccgcgggggctccccttcgccgtcgacacgtggggcccctcctcc
cgccaccggcgccaccgcttcctcacccacgcgcaccgggaccacctcgtcggcgccggt
gccgccgccgcagatgggtccggcggcaccgtctacgccacccgcctcaccttggccctc
gcgcttcgccactttccccagctggagagctgggtgttcgtggacatggaggtggggagg
acggtggctgtggatgatcccgccggctccttcgccgtcaccgcgtacgacgcaaaccac
tgccctggggcggtcatgttcttgtttgagggtcaatttggtaccatacttcacacaggg
gactgtcggcttacatcggattgtgtacagaatctgccaatgaaatacatagtgaagaaa
ggaaaagagaacatttgccgacttgactttgtgtttctagattgcaccttctccaaatgc
ttcctcaagctaccaagcaaggaatcagcaatccagcaggtaatagcgtgcatatggaag
catccacatgcaccttatgtttaccttgcttgtgaccttcttgggcatgaagatatcctt
gttgaggtgtctaggacattcgggttgaagatttatgttgaccagaaattggattgtttt
aaagcactgtcactcacagcccctgaaatcatcactgatgatccatcttctcgctttcag
attgtcggattccaccaattatatgatacagcaagtaggaagcttgaagaagcaagggca
agtctcctgccagaacccttgtttattcgtccatcaacacagtggtatgcaatctgtgct
cgaagccagaaacctagcctaacagaagctgagcaggatgagtttggagtatggcatatt
tgtttctccattcactcctctcgtgatgagttggagcaggcgctgcaacttctgcagcct
cagtgggtcatttcaacaactcccccgtgcttcgccattgagctcagctatgttaagaaa
cattgttttaagacccgcttaaaagctgatgatccactgtggaaaatagtcagagatcct
cttcaaaagtcagtgtcgtccccttgttcagtgcttgcttctgaaacacatagagacaaa
gatcactcagactttgttgacggggatgatcattcattgtcctccagcgaagaatgcacg
tatctaaacgtcaggacccttgaactgaaatttgtgccatcccctccacctgatgaacca
gaaattacattgtttggaagagctaggtttggttctcaggcaattgacataatgaaagaa
gagctatgcaaccagtacatcacctttgaagaaggatgtcttgaagaagctagggcatgt
gcaccggtggattcggttcatggtaatagtgaagacgttgagactaattctgcaacggga
tgtgttaaggacgcaccaacctcccatcacgatcacatggaagctggagatgaggtgggt
tcttgtcagcatgaagcatacttgaagcaatcagaagcatttcaagcccagtcattgccc
acaattcaacgtaatattttagtgcttgctgatgagcatggaaagtttgaagctgcaaaa
gagtcaaaatcatcaagtttttccgaagactcgagcctttccatagtcagaagtggagaa
acaactacttgtgaaaaggaacccttgtgcattattggatcatccaaatgtttgaatcca
agtttgaagaggctttacaggtcaaggaatatccctgttccacggcctctcccatcgctt
gtcagacttttggaatcctcaaagcgggtcaaaatgcaaccaagtacttgtagttcgttg
aactcacggcacagcttaccctaa

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