KEGG   Panicum virgatum (switchgrass): 120672026
Entry
120672026         CDS       T07260                                 
Name
(RefSeq) protein SGT1 homolog
  KO
K12795  suppressor of G2 allele of SKP1
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04626  Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04626 Plant-pathogen interaction
    120672026
SSDB
Motif
Pfam: SGS TPR_19 CS TPR_2 TPR_8 ANAPC3 TPR_16 TPR_1 TPR_BSK1_C TPR_9 TPR_17 TPR_14 TPR_11 PSCyt1 NYD-SP12_N
Other DBs
NCBI-GeneID: 120672026
NCBI-ProteinID: XP_039808251
LinkDB
Position
5N:8364824..8367136
AA seq 356 aa
MATPTPSELEHRAKEAFFDDDFALAAALYTQAIAAGPPSAALYADRAQAYIKMGDFAAAA
ADAARAAELDPAMPRAHLRRAHACVKLEQYDAARAAVEAGAALAPGDARFAKLMREIDDK
APKPMESEASAAVAATVPTPAPTSAEKPKYRPDYYNSAAEVVVTVFAKGVAPEHVAVDFG
EQLLSVSVEVPGEAPYHLQPRLFGKIVPDECRFAVLSTKIEVRLAKAEPGTTWTSLEYTD
KPRFVAAAAPRGSSSAAAAAGAQRPSYPSSRGRKDWDKIEAEVKRAEKEEKLDGDAAANK
FFQDIFSNADEDMRRAMTKSFQESNGTVLSTNWEDVGSKKIEPSPPEGMDLRKWEY
NT seq 1071 nt   +upstreamnt  +downstreamnt
atggcgacgccgacaccctccgagctcgagcacagggcgaaggaggccttcttcgacgac
gacttcgccctcgccgccgcgctctacacgcaggccattgccgcgggtcccccctccgcg
gcgctctacgccgatcgcgcccaggcctacatcaagatgggagatttcgccgcggccgcc
gcggacgccgcccgcgccgccgagctcgaccccgccatgccccgggcgcacctccgcagg
gcccacgcctgcgtcaagctggagcagtacgacgccgcccgggccgccgtcgaggccggc
gccgccctggcccccggcgacgcgcggttcgccaagctgatgagggagatcgacgacaag
gcgcccaagccgatggagtccgaggcgagcgccgccgtcgccgccaccgtgcccacgccc
gcgccgacttctgcggaaaagcccaagtaccggcccgactactacaacagcgcggcggag
gtggtggtgaccgtgttcgccaagggcgtagcccccgagcacgtcgcggtggatttcggc
gagcagctgctgagcgtgtccgtggaggtccccggcgaggcgccgtaccacctgcagccc
cgtctgttcggcaagatcgtccccgacgagtgccggttcgccgtcctctccaccaagatc
gaggtccgcctcgccaaggccgagccggggacgacgtggacgtcgctggagtacaccgac
aagccaaggttcgtcgccgcggcggcaccgcgcgggagcagctccgccgccgccgccgcc
ggcgcccagaggccgagctacccgtcgtccaggggccggaaggactgggacaagatcgaa
gcggaggtgaagagggcggagaaggaggagaagctggacggcgacgcggcggccaacaag
ttcttccaggacatcttcagcaacgcggacgaggacatgcggcgggccatgaccaagtcg
ttccaggagtccaacggcacggtgctgtcgaccaactgggaggacgtcggctccaagaag
atcgagcccagcccgccggaaggcatggatctgcgcaagtgggagtactga

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