Panicum virgatum (switchgrass): 120672026
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Entry
120672026 CDS
T07260
Name
(RefSeq) protein SGT1 homolog
KO
K12795
suppressor of G2 allele of SKP1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120672026
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Motif
Pfam:
SGS
TPR_19
CS
TPR_2
TPR_8
ANAPC3
TPR_16
TPR_1
TPR_BSK1_C
TPR_9
TPR_17
TPR_14
TPR_11
PSCyt1
NYD-SP12_N
Motif
Other DBs
NCBI-GeneID:
120672026
NCBI-ProteinID:
XP_039808251
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Position
5N:8364824..8367136
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AA seq
356 aa
AA seq
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MATPTPSELEHRAKEAFFDDDFALAAALYTQAIAAGPPSAALYADRAQAYIKMGDFAAAA
ADAARAAELDPAMPRAHLRRAHACVKLEQYDAARAAVEAGAALAPGDARFAKLMREIDDK
APKPMESEASAAVAATVPTPAPTSAEKPKYRPDYYNSAAEVVVTVFAKGVAPEHVAVDFG
EQLLSVSVEVPGEAPYHLQPRLFGKIVPDECRFAVLSTKIEVRLAKAEPGTTWTSLEYTD
KPRFVAAAAPRGSSSAAAAAGAQRPSYPSSRGRKDWDKIEAEVKRAEKEEKLDGDAAANK
FFQDIFSNADEDMRRAMTKSFQESNGTVLSTNWEDVGSKKIEPSPPEGMDLRKWEY
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccgacaccctccgagctcgagcacagggcgaaggaggccttcttcgacgac
gacttcgccctcgccgccgcgctctacacgcaggccattgccgcgggtcccccctccgcg
gcgctctacgccgatcgcgcccaggcctacatcaagatgggagatttcgccgcggccgcc
gcggacgccgcccgcgccgccgagctcgaccccgccatgccccgggcgcacctccgcagg
gcccacgcctgcgtcaagctggagcagtacgacgccgcccgggccgccgtcgaggccggc
gccgccctggcccccggcgacgcgcggttcgccaagctgatgagggagatcgacgacaag
gcgcccaagccgatggagtccgaggcgagcgccgccgtcgccgccaccgtgcccacgccc
gcgccgacttctgcggaaaagcccaagtaccggcccgactactacaacagcgcggcggag
gtggtggtgaccgtgttcgccaagggcgtagcccccgagcacgtcgcggtggatttcggc
gagcagctgctgagcgtgtccgtggaggtccccggcgaggcgccgtaccacctgcagccc
cgtctgttcggcaagatcgtccccgacgagtgccggttcgccgtcctctccaccaagatc
gaggtccgcctcgccaaggccgagccggggacgacgtggacgtcgctggagtacaccgac
aagccaaggttcgtcgccgcggcggcaccgcgcgggagcagctccgccgccgccgccgcc
ggcgcccagaggccgagctacccgtcgtccaggggccggaaggactgggacaagatcgaa
gcggaggtgaagagggcggagaaggaggagaagctggacggcgacgcggcggccaacaag
ttcttccaggacatcttcagcaacgcggacgaggacatgcggcgggccatgaccaagtcg
ttccaggagtccaacggcacggtgctgtcgaccaactgggaggacgtcggctccaagaag
atcgagcccagcccgccggaaggcatggatctgcgcaagtgggagtactga
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