Panicum virgatum (switchgrass): 120672222
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Entry
120672222 CDS
T07260
Name
(RefSeq) auxin response factor 3-like
KO
K14486
auxin response factor
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120672222
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Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
Motif
Other DBs
NCBI-GeneID:
120672222
NCBI-ProteinID:
XP_039808479
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Position
5N:complement(57197824..57209092)
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AA seq
681 aa
AA seq
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MGIDLNMVDGEGEERRPPPAVCLDLWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDVA
ADLPPHVVCRVADIELCADAATDEVYARLALVAEGEAFGRNVRVGGVEGDEDMEDFDAER
KSRMLHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKF
RHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAVQLKNEALFEE
FSSDSAKRHTLSAVYDSLKHKSVFHISYNPRAAASEYIIPYRKFLKSLNHPVCIGARINF
QCQNEDVSERRSGMVVGNSEVDPMKWPGSKWRSLLVRWEDGSECNGQDRVSPWEIDIVGG
SVSAAHSLSASSSKRTKLCPPGNLDVPTMWNGCTDSVETGKLPRVLQGQELMGFRTHRVT
CAPQTAEVAKFQSSDANRFLTNARSCMLSGPTGRLAVQNSGFTYQSVGFSESIGFSEVLQ
GQEISQAVPMFQGMMSEACSLKGGYGLRGYVHTPAAVNGLSATAQECSLTLCTPPAAQVP
PHPNHMFNQTVSSQLGLGNKSVGEVANGSQPRPFDMSWEAQTRPQHEIPAQISLDQFEAR
RASAPGDAAKIGSGGREVRKTSCRLFGFSLTEKILPADDDGVKEVSYEAECQNPRMLDLF
GYNRSTPSAALPALCAAPFGM
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcgatctcaacatggtggacggcgagggcgaggagcggcgccccccgccggcg
gtgtgcctggacctgtggcacgcgtgcgcggggcccgtggtcgcgctgccgcggcggggc
agcctcgtcgtgtacctgccgcagggccacctcgctgcggccggcggcggggacgtcgcg
gcggacctgccgccgcacgtggtgtgccgcgtcgcggacatcgagctatgcgcggatgcg
gcgacggacgaggtgtacgcacggctggcgctggtggcggagggtgaggcatttgggaga
aatgtgcgtgttggtggagttgaaggggacgaggacatggaggattttgatgctgaaagg
aagtcccggatgctgcacatgttctgcaaaacgctcactgcctctgacacaagcacgcat
ggagggttctctgttcctcgtcgagctgctgaggactgtttcccaccgctggactataat
caactcaggccttctcaagagcttgttgccaaggatttgcatggagccaagtggaagttt
cgtcatatttataggggtcagcctcgtaggcatctcttaacaactggatggagttcattt
gtcaataaaaagaaactggtttcaggggatgcagtcttatttctccgaggtgatgatggt
gaactaagactgggtgtaaggagagctgttcagcttaaaaatgaggccctttttgaagaa
ttcagtagcgacagtgcaaagcgacatacgttgtctgctgtatatgattccttgaaacat
aaaagtgtctttcacatttcttacaatccaagagctgctgcttcagaatatataattcct
taccggaagttccttaagagcctcaaccatccagtctgtattggagcgaggatcaacttc
caatgccagaatgaagatgttagtgaaaggcgatctggaatggttgttggcaatagtgaa
gtagatcccatgaaatggcctggctcaaagtggagaagcctgctggtaagatgggaggat
ggttctgaatgcaatggccaagatagagtatctccatgggagatcgatatagttggtggc
tcagtctctgctgcccattctctgtccgcatctagttctaaaagaaccaagttatgccct
ccgggaaatttggatgttccaacaatgtggaatggttgtactgactccgtggaaactgga
aagttacccagggtcttgcaaggtcaagaattgatgggttttaggactcatcgtgttacg
tgtgctcctcaaacagctgaggttgcaaaatttcaatcttctgatgctaataggttcctt
actaatgcacgaagctgcatgttgagtggtccaacaggcagacttgcagtacagaactct
ggctttacctaccaatctgtaggcttcagtgaatctattggattctcagaggtcttgcaa
ggtcaagaaatttctcaggcagttcctatgttccaaggaatgatgtctgaggcatgttca
ctgaagggcggatatgggctgcgtggttatgtgcataccccagctgctgttaatggatta
tcagccacagctcaagaatgttctctcacactatgtactccacctgcagcacaagtgccc
cctcatcccaatcatatgtttaaccaaactgtgtcgtcccagcttggattgggaaacaag
tctgttggcgaagttgcaaatggcagtcagcctcgcccatttgatatgtcgtgggaagct
cagaccaggccacagcatgaaatacctgctcaaattagcttggatcaatttgaggctagg
agagcttcagcacctggagatgctgctaaaattgggtctggtggaagggaggtgcgcaaa
actagctgcaggctttttggtttctcattgactgagaagatcttgccagctgatgatgat
ggcgtgaaggaagtgagttatgaggctgagtgccagaatccacggatgctggacttgttc
gggtacaaccgctccaccccaagtgctgctcttccagctctctgtgccgcccccttcgga
atgtga
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