Panicum virgatum (switchgrass): 120672224
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Entry
120672224 CDS
T07260
Name
(RefSeq) nuclear transcription factor Y subunit B-3-like
KO
K08065
nuclear transcription Y subunit beta
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120672224
Transcription factors [BR:
pvir03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
120672224
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Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
CENP-T_C
Bromo_TP
TFIID_20kDa
Motif
Other DBs
NCBI-GeneID:
120672224
NCBI-ProteinID:
XP_039808482
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All DBs
Position
5N:complement(62661974..62664829)
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AA seq
161 aa
AA seq
DB search
MADDGGSHEGGGGVREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVT
SEASDKCQKEKRKTINGDDLLWAMATLGFEEYVEPLKMYLHKYREMEGDSKLSTKAGEGS
VKKDAISPHGGTSSSSNQLVQHGVYNQGMGYMQPQYHNGDT
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacggcgggagccacgagggcggcggcggcgtccgggagcaggaccggttc
ctgcccatcgccaacatcagccgcatcatgaagaaggccgtcccggctaacggcaagatc
gccaaggatgccaaggagaccctgcaggagtgcgtctccgagttcatctccttcgtcacc
agcgaggccagcgacaagtgccagaaggagaagcgcaagaccatcaacggcgatgatctg
ctctgggcgatggctacgctcggattcgaggagtacgtcgagcccctcaagatgtaccta
cacaagtacagagagatggagggtgatagtaagttgtctacaaaggctggtgagggctct
gtaaagaaggatgcaattagtccccatggtggcaccagtagctcaagtaaccagttggtt
caacatggagtttacaaccaagggatgggctatatgcaaccacagtaccataatggggat
acctaa
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integrated database retrieval system
