Panicum virgatum (switchgrass): 120672230
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Entry
120672230 CDS
T07260
Name
(RefSeq) tubby-like protein 4
KO
K19600
tubby and related proteins
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pvir03037
]
120672230
04990 Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
120672230
Cilium and associated proteins [BR:
pvir03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
120672230
Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
Other domain-containing proteins
Tubby family proteins
120672230
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SSDB
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GFIT
Motif
Pfam:
Tub
DUF3527
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-GeneID:
120672230
NCBI-ProteinID:
XP_039808511
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All DBs
Position
1K:complement(6244704..6247266)
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AA seq
399 aa
AA seq
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MATTPNPRREPLRPRSSNAPAALAPAPARRGPASAEKENVGNEEEKGKGKGKAKTAAAAA
AAAATEPSKPARPAPAVAPPPPPLKPSSLQLRMKDESAEAPVLMGPRSRELLPPPSSSYE
AWDLSDSESAPASSWATLPNRALLCRPLPQDVGRCTCVIAREAAAGARGVALYSLYTNEG
QGRQDRKLAVARHRRRRGRSEFVVAQNQDGIFCASDKNFLGTVAANLVGSKYQILVQGNR
VDEMKSHSKRLLGVVAFAPTITTLTGSYRSMRAWIPKNQSMQLKTNNSAQIQHISGLPKD
WQEKKSRADQLCSRAPFYNHMTKRYELDFRERAGRMGYKVQTSVKNFQMTLEENGRQTVL
QLGRVGKSKYIMDFRYPLTGYQAFCICLASIDSKLCCTL
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacgcccaaccccaggagggagccgctgcgtccccggagcagcaacgccccc
gcggctctggctccggctccggcgaggcgcgggccggcctccgcggagaaggagaacgtc
gggaacgaggaggagaaggggaaggggaaggggaaggctaagactgcggctgcggctgcg
gctgcggctgctactgagccgtcgaagcccgcgaggccggcaccggcggtagcgccgccg
ccgccgccactgaagccgtcgtcgttgcagcttcgcatgaaggacgagtcggcggaggcg
ccggtgctcatggggccgaggagccgggagctgctcccgccgccgtcctcgtcctacgag
gcgtgggacctctccgacagcgagtccgcgccggcctcctcctgggccacgctccccaac
agggcgctcctgtgccggccgctgccgcaggacgtcgggcggtgcacctgcgtcatcgcc
agggaggccgccgccggagccaggggagtcgcgctctactccctctacaccaatgagggg
caggggcggcaggaccggaagctggcggtggcgcggcaccggaggaggagggggaggtcg
gagttcgtcgtggcgcagaaccaggacggcatcttctgcgcctccgataagaacttcctc
ggcacggtcgccgccaacctcgtcggatccaaatatcaaatcctggtccaggggaaccgg
gtggatgagatgaagagccactcgaagcggcttcttggcgttgtcgcgtttgcccccacc
atcaccacgcttacagggagttacagaagcatgagggcttggataccgaagaaccagtcc
atgcagctcaagaccaacaattctgctcagattcagcacatcagtgggctcccaaaggac
tggcaggagaagaagagcagagctgaccagctatgctcaagagcccctttctacaaccat
atgacaaagcgctatgaactggacttcagggagagggcaggaaggatgggatacaaggtt
cagacctcagtgaagaacttccagatgaccctagaggaaaacgggaggcagacggtcttg
cagcttggtagggttgggaaatccaagtacataatggacttcagatacccgttgactggc
taccaagcgttctgcatttgcctggcgtcgatcgactccaagctgtgctgcaccctgtga
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