Panicum virgatum (switchgrass): 120672270
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Entry
120672270 CDS
T07260
Name
(RefSeq) ruvB-like protein 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120672270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120672270
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pvir03037
]
120672270
Enzymes [BR:
pvir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
120672270
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
120672270
Chromatin remodeling factors
SRCAP complex
120672270
INO80 complex
120672270
INO80 complex (yeast)
120672270
SWR1 complex
120672270
ASTRA complex
120672270
Cilium and associated proteins [BR:
pvir03037
]
Motile cilia and associated proteins
Dynein assembly factors
120672270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_16
Cdc6_lid
bpMoxR
DnaB_C
AAA_25
AAA_18
Raco_middle
Motif
Other DBs
NCBI-GeneID:
120672270
NCBI-ProteinID:
XP_039808521
LinkDB
All DBs
Position
5N:63073304..63077908
Genome browser
AA seq
455 aa
AA seq
DB search
MRIEEVQSTSKKQRIATHTHIKGLGLDANGAALAMASGFVGQVGAREACGLIVDMIRQKK
MAGRALLLAGPPATGKTALALGVSQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAI
GLRIKENKEVYEGEVTELSPEEAESTTGGYAKSISHVIIGLKTVKGTKQLKLDPSIYDAL
IKEKVAVGDVIYIEANSGAVKRVGRCDSFATEYDLEAEEYVPIPKGEVHKKKEIVQDVTL
HDLDVANAQPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGIAELVPGVLF
VDEVHMLDIECFSYLNRALESPLSPIVILATNRGICNVRGTDMTSPHGIPVDLLDRLVIV
RTETYGPTEMIQILAIRAQVEEIDIDEESLAYLGEIGQQTSLRHAIQLLSPASVVAKTNG
REKICKADLEEVSGLYLDAKSSARLLQEQQERYIT
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcgaggaggtgcagtcgacgtcgaagaagcagcgcatcgccacccacacccac
atcaagggcctcggcctcgacgccaatggggcggcgcttgcgatggcgtcggggttcgtg
gggcaggtgggggcgcgggaggcgtgcggcctgatagtcgacatgatacgccagaagaag
atggccggccgcgcgctgctccttgcgggcccgcccgccacgggaaagacggcgctcgcg
ctcggcgtctcccaggagctcggcagcaaggtccctttctgccctatggtaggatcagaa
gtgtactcctcagaggtcaagaaaactgaggtgctgatggaaaattttcgtagagctata
ggtctgcgtataaaggaaaacaaagaggtttatgaaggagaggttactgaactttccccg
gaagaggctgagagtacaacaggtggatacgcaaaaagcattagccatgtaatcataggt
ctaaagactgttaaagggactaagcaactgaagttagatccttcaatttatgacgcttta
atcaaggaaaaggtggcagtgggtgatgttatatacattgaagcaaatagtggtgctgtg
aaaagagttggtaggtgcgattcatttgctacagaatatgatcttgaagctgaggagtat
gttccaatccccaaaggcgaagtccataagaaaaaggaaatagtacaggatgtcacactt
catgacctggatgttgcaaatgctcagccacaaggaggccaagatattttatcacttatg
ggccaaatgatgaagccgcggaagactgaaatcactgacaaactacgccaagaaattaat
aaggtggtaaatagatatatcgacgaaggaattgcagagcttgtgcctggtgttttgttc
gttgatgaggtccacatgttggacattgaatgcttttcttatctgaatcgtgcactggag
agcccattatcaccgattgtgatacttgctacaaataggggaatatgtaatgtaagaggt
actgatatgacaagtccacatggtataccagttgaccttctagataggctggtgattgtt
cgaacagaaacatatggccctactgagatgatccagatactagctatccgagcacaagtg
gaagagattgatattgatgaagagagtcttgcttatttaggagagatcggacaacagact
tctttgagacatgctattcagctgctatcacctgccagtgtggttgcaaagactaatgga
agagagaagatctgcaaggctgatcttgaggaagttagcggactctatttggatgccaaa
tcgtcagctcgtctgctccaggagcaacaagaaagatacatcacttag
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