Panicum virgatum (switchgrass): 120672356
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Entry
120672356 CDS
T07260
Name
(RefSeq) ABC transporter G family member 31-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120672356
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120672356
Transporters [BR:
pvir02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
120672356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_16
AAA_29
AAA_25
AAA_33
AAA
AAA_28
RsgA_GTPase
ABC_ATPase
Goodbye
Motif
Other DBs
NCBI-GeneID:
120672356
NCBI-ProteinID:
XP_039808641
LinkDB
All DBs
Position
5N:5423520..5437235
Genome browser
AA seq
1426 aa
AA seq
DB search
MWAAEAAFSRSGSWREAEDEREALRWAALQRLPTVARARRGLLRSPAPDGAAAVEGDDVL
CEVDVAGLSSGDRTALVDRLLADSGDAEHFFRRIRSRFDAVNIEFPKIEVRYEDLTVDAY
VHVGSRALPTIPNFICNMTEAFLRHLRIYRGRRVKLPILDNISGIIRPSRMTLLLGPPSS
GKTTLLLALAGRLGPGLKMSGNITYNGHHLNEFVPQRTSAYVSQQDWHASEMTVRETLEF
AGRCQGVGIKYDMLVELLRREKNAGIKPDEDLDVFMKALALEGKQTSLVAEYIMKILGLD
ICADTIVGDEMIKGISGGQKKRLTTGELLVGSARVLFMDEISTGLDSATTYQIIKYLRHS
THALDGTTIISLLQPAPETYELFDDVILIAEGQIVYQGPREYAVDFFAAMGFRCPERKNV
ADFLQEVLSKKDQQQYWCHYNYPYQFVSVSKFADAFKTFIIGKRLQEELAVPYNRHRNHP
AALCTSSYGVKRLELLKSNYQWQRLLMKRNSFIYVFKFIQLLLVALITMTVFFRSTMHHD
SVDDGIIYLGALYFAIVMILFNGFTEVSMLVAKLPVLYKHRDLHFYPPWAYTLPSWLLSI
PISLCESGMWVLVTYYVVGYDPKFTRFLGQFLLLFFLHQTSLALFRVMASLGRNMIVANT
FGSFALLVVMILGGFIITKESIPVWWIWGYWVSPMMYAQNAISINEFHGHSWSKQFANQN
ITMGEAILTGYGLFNEKYWFWIGVGALFGYAVVLNILFTMFLTILNPIGNLQAVVSKDKI
RHKDSRRKNDRVALELRSYLHSNSLSGNLKEQKGMVLPFQPLSMCFRNINYYVDVPEELK
KQGIAEDRLQLLVDVTGAFRPGILTALVGVSGAGKTTLMDVLAGRKTGGLIEGSITISGY
PKNQETFTRISGYCEQNDVHSPCLTVIESLLYSACLRLPSHVDADTQRAFVEEVMELVEL
NPLSGALVGLPGVNGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARSAAIVMRTVRN
IVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGQLIYAGPLGAKSRNLVDFFEAIPGVPK
IRDGYNPAAWMLEVTSTQMEQILGVDFAEYYRQSKLFQQTREIVEVLSRPSSESKELTFA
TKYAQPFCAQYIACLWKQNLSYWRNPQYTAVRFFYTVIISLMFGTICWKFGSRRETQHDI
FNAMGAMYAAVLFIGITNATSVQPVIAIERFVSYRERAAGMYSALPFAFSLVTVEFPYIL
VQSLIYGTIFYSLGSFEWTAAKFLWYLFFMYFTLLYFTFYGMMTTAITPNHLVAPIIAAP
FYTLWNLFCGFMIPRKRIPVWWRWYYWANPVSWTLYGLLTSQFGDLDQPLLLADGATSTT
VAAFLQEHFGFRHDFLGVVAAMVAGFCVLFAVVFALAIKYLNFQRR
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcggcggaggcggcgttctcgcgctcggggtcgtggcgggaggcggaggacgag
cgggaggcgctgcggtgggccgcgctgcagcggctccccaccgtcgcacgcgcgcgccgg
ggcctgctccggtccccggcgcccgacggcgccgcggccgtcgagggggacgacgtgctc
tgcgaggtcgacgtcgcggggctctcctccggcgaccgcaccgcgctcgtcgaccgcctc
ctcgccgactccggcgacgccgagcacttcttccggcgcatacgcagccgcttcgacgcc
gtgaacatagagttccccaagatcgaagtgaggtacgaggatctgacggtggacgcgtac
gtgcacgtcgggagcagggcgctgccgaccatcccgaacttcatatgcaacatgacggag
gcgttcctgaggcatctgaggatctaccgaggaagaagagtgaaattgccgattttggac
aacatcagcgggataattcgcccatcaagaatgacactgcttttgggtcctccaagctct
gggaagaccaccttgcttctagctcttgctggacgtctcggccctggactaaagatgtct
gggaatattacttacaatggccaccatttaaatgagttcgtgcctcagcgaacatctgct
tatgtcagtcagcaagactggcatgcttcagagatgacagtcagagaaactctagagttt
gctgggcgctgccagggtgttggaataaagtatgatatgcttgttgaattactgaggaga
gaaaagaatgcggggataaaacctgatgaggaccttgatgtgttcatgaaggcgttggca
cttgagggaaaacagacaagccttgtggcagagtatataatgaagattttagggctcgac
atctgtgctgataccattgttggagatgaaatgatcaaagggatctccggagggcagaag
aaacgcttgacaacaggtgaactgctagttggatctgcccgtgtgctgttcatggatgag
atatctacaggccttgacagtgcaacgacatatcagatcatcaagtatctaaggcattct
acacatgctcttgatggcactacaatcatatccttgctgcagccggctccagaaacttat
gaactattcgatgatgtcattcttatagccgaaggtcaaattgtataccagggccctcgt
gaatatgctgttgacttttttgctgctatgggattcaggtgtccagaaagaaaaaatgtg
gcagattttttgcaagaagttttgtccaagaaagatcagcagcagtactggtgccactac
aattatccgtaccagtttgtttctgtgtcaaaatttgctgacgcctttaaaacatttatt
attggtaagagattgcaggaggaattagctgtgccatacaacagacatcgcaatcatcct
gcagctctttgtacatcaagttacggtgtcaagaggcttgagcttctcaagtccaactac
cagtggcagcgtctcctcatgaaaaggaactcattcatctatgtcttcaaattcattcag
cttctacttgttgctcttatcacaatgacagtgtttttcagatcaacaatgcaccatgat
tcagttgatgatggaatcatttatctaggagccctttactttgcaatagtcatgattctg
ttcaatggcttcactgaagtctcaatgttggtcgcaaagcttcctgttctttacaagcac
agggacctgcacttctacccaccatgggcttatacacttccttcttggctcttgagcatc
ccaatctcactttgtgaatcaggaatgtgggtacttgtaacatattatgtagttggctat
gatcccaagtttacaagatttttgggacaatttttgttgcttttctttctgcaccaaaca
tctttggcccttttccgggtcatggcatctttgggccgtaatatgatagttgctaacacc
tttggatcatttgctttgttggttgttatgattcttggaggattcatcataaccaaagaa
agcataccagtctggtggatttggggttattgggtctctcctatgatgtatgcacaaaat
gctatttccatcaacgaattccatgggcattcttggagcaagcaattcgcaaaccagaac
atcacaatgggcgaagcgatactcactggatatgggttattcaatgaaaaatactggttc
tggattggtgttggagcattgtttggttatgcagttgttttgaacattttgttcacaatg
ttcttgacgattctcaaccctattggtaatctgcaagctgttgtgtccaaagataaaatt
cggcacaaggattctaggaggaagaatgacagggtagccctggagctaagatcttatctg
cactcaaattcattaagtggtaatctcaaggaacagaagggtatggtgttaccttttcaa
cctctttcaatgtgctttaggaatatcaactactacgttgatgtaccagaggaattaaaa
aagcaaggcatagcagaagaccgactacagctgcttgttgatgtcactggagcattcagg
ccaggaatactgacagcacttgttggggtcagtggagctggcaaaactaccctcatggat
gttttagctggccggaagactggaggtctcatagagggaagcattactatatctgggtat
cctaagaaccaagagaccttcactaggatctctgggtattgtgaacagaatgatgtccat
tcaccttgcttgactgtgattgagtctttgttatactcagcatgcctccggttgccttct
catgttgatgctgacactcaaagggcttttgttgaagaggtcatggaactcgttgagttg
aatcccttaagtggtgctcttgttggtctgcctggggtaaatggtttatctacagaacaa
cgtaaaaggttgacaattgctgtggagctagttgcaaatccttctattgttttcatggac
gaacccacatcaggattggatgctagatctgcagccattgtgatgaggactgtgcgaaat
atcgttaatacaggacggaccattgtctgcaccatccatcaaccaagtattgacatattc
gaatcatttgatgagcttttgttcatgaagcgtggagggcaacttatatatgctggcccc
ttaggtgccaaatcacgcaatctggttgacttttttgaggcgattccaggagtgcccaaa
atcagggatggctataatcctgctgcatggatgttggaagtcacaagtactcaaatggag
cagattcttggagtggattttgctgaatactatcgacaatcaaaattatttcagcagacc
agagaaatcgttgaggtcctgagcagaccgagcagtgaatcaaaagaacttactttcgcg
acgaagtatgcccaaccgttttgtgctcagtatattgcttgcttatggaagcaaaaccta
tcatactggaggaaccctcaatataccgcagttcgattcttctacacagttatcatttct
ttgatgtttggaactatttgctggaaattcggttctagaagggagacccaacatgacata
ttcaatgccatgggcgccatgtatgcagcagtgttgttcataggaattaccaatgcgact
tctgttcagccagtgatcgccatcgaaagatttgtatcctacagagagcgagctgctggg
atgtattcagcattgccttttgcattttctctggtcactgtggagttcccttacatcctt
gtgcagtcccttatctacggcacaatcttctacagtttgggatcatttgagtggacagca
gctaagttcctgtggtacctgttcttcatgtacttcacgttgctgtacttcaccttctac
ggcatgatgacgacggcgatcactccaaaccatttggttgcgcctattattgctgctcca
ttctacacgctgtggaatctcttctgcggattcatgatcccgagaaagcgcatccccgtg
tggtggcggtggtactactgggccaacccggtgtcgtggacgctctacggcctcctgacg
tcgcagttcggtgacctggaccagcccctgctgctcgccgacggcgccacctccaccacc
gtggcggcgttcctccaggagcacttcgggttccgccacgacttcctcggcgtcgtcgcc
gccatggtcgccggcttctgcgtcctcttcgccgtcgtcttcgccctcgccatcaagtac
ctcaacttccagcgaagataa
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