Panicum virgatum (switchgrass): 120672367
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Entry
120672367 CDS
T07260
Name
(RefSeq) ATP-dependent zinc metalloprotease FTSH 9, chloroplastic/mitochondrial-like isoform X1
KO
K08955
ATP-dependent metalloprotease [EC:3.4.24.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120672367
Peptidases and inhibitors [BR:
pvir01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
120672367
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
AAA_5
AAA_22
RuvB_N
TIP49
AAA_28
nSTAND3
AAA_lid_PRS2_C
AAA_18
AAA_14
AAA_2
AAA_16
ATPase
AAA_17
SPESP1
DUF1319
IstB_IS21
Mg_chelatase
Zeta_toxin
SLFN-g3_helicase
DUF815
Trypan_PARP
TsaE
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
120672367
NCBI-ProteinID:
XP_039808661
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Position
5N:complement(46472703..46483946)
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AA seq
782 aa
AA seq
DB search
MSALQASLLLRPLPSPLPPRRRLPLPSASASFPRAAPAHRRAPLYLRALAPDAPQPAAPE
PPAAAAAAEAEPEPEPEPEPEPEAEAEATGAAAAAQPAAMSGNGELEDLVDKARAWVVAV
AAAVVAAVRRFVDWVVSGDWMRWWPFWRPDRRLQRLIEDADANPTDAAKQSALLHELNKF
SSPEEVIKRFEQRSHAVDSRGVAEYLRALILTNAIADYLPDEQSGRSASLPALLQELKQR
VSGNEDKPFMNPGISEKQPLHVVMVDPKTTGRSTRFAQEIFSTILFTIAVGVMWVMGAAA
LQKYIGSLGGIGASGVGSSSSYSPKEINKDIMPEKNVKTFKDVKGCDDAKKELEEVVEYL
KNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGAR
RVRSLFQAAKKKAPCIVFIDEIDAVGSTRKQWEGHTKKTLHQLLVEMDGFEQNEGIIVMA
ATNLPDILDPALTRPGRFDRHIVVPSPDVRGRQEILELYLQDKPVANDVDINAIARSTPG
FNGADLANLVNIAAIKAAVEGADKLTAAQLEFAKDRIIMGTERKSMFISNESRKLTAYHE
SGHAIVALNTQGAHPIHKATILPRGSALGMVTQLPSQDETSISKKQLQARLDVCMGGRVA
EELIFGEDNVTTGARNDLHTATELAQYMVSNCGMSDAIGPVHVKERPSVEMQSRIDAEVV
KLLREAYGRVKRLLKKHEKQLHALANALLEHETLTADEINKVVHPYQEEPQFSFQDEEFA
LT
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcttcaggcctccctcctcctccgcccgctcccctcgccgctgcccccgcgg
cgccggctgccgctcccctccgcgtccgcctccttcccccgcgcggcccccgcgcaccgc
cgcgccccgctctacctccgcgcattggcccccgacgcgccgcagcccgccgcacccgag
ccacccgcggccgcggccgcggcggaggccgagcccgagcccgagcccgagccggagccc
gagcctgaggcggaggcggaggccacgggcgcggcagctgcggcgcagcccgcggcgatg
agtgggaacggggagctggaggacctggtggacaaggctagggcctgggtcgtggcggtt
gcggccgcggtggtggccgcggtaaggaggttcgttgactgggtggtgtcgggggactgg
atgagatggtggcccttctggcggcccgaccgccgcctgcaacggctgatcgaggacgcg
gacgccaaccccaccgacgccgccaagcagagcgcgctcctccacgagctcaacaagttc
agcagcccggaagaggtcattaaaaggtttgagcaaagaagtcatgctgtggatagcaga
ggggttgcagagtacctccgggcactaattctcactaatgctatagctgattaccttcca
gatgaacaatctgggaggtctgcaagtctgccagccctgttgcaagagttgaagcagcgt
gtatctgggaatgaggacaaacctttcatgaaccctgggatatcagaaaagcaaccgtta
catgtagtaatggttgaccccaaaacaactggtagatcaacacggtttgctcaagagatc
ttctcaactatcttgttcacaattgctgttggagtaatgtgggtgatgggtgctgctgcg
cttcaaaaatatatcggtagcttaggtggaattggggcatctggtgtcggttctagctca
tcatattccccaaaagagatcaataaggatatcatgcccgagaagaatgtcaagacattt
aaagacgtcaaagggtgcgatgatgcaaaaaaggaacttgaggaggtagttgagtatctc
aaaaacccttcaaagttcactcgccttggtggaaagctaccgaagggaatacttttgact
ggtgctccaggaactgggaaaacactacttgcaaaggccattgctggagaagctggtgta
ccatttttctaccgagcaggttcagaatttgaggaaatgtttgttggtgttggtgctagg
agagtgagatcattgtttcaagccgcaaagaagaaggcaccatgcattgtattcattgat
gaaatagatgctgtgggttcaactcgaaaacagtgggaagggcacacaaagaaaacactg
catcaacttcttgttgagatggatgggtttgaacagaacgagggaataattgtaatggct
gcaacaaacttgccagacattcttgaccctgcactcacgcgacctggtagatttgatagg
catattgttgtcccaagcccagatgtgcggggccgccaagagattctggagctctatttg
caagacaagccagtggccaatgatgtagatatcaatgcaattgctcgtagtacacctggt
tttaatggggctgaccttgcgaaccttgtaaacattgcagcaattaaggctgcagttgaa
ggtgctgacaagttgactgctgcacaattggagtttgccaaagatcgtattatcatggga
actgagaggaaatcaatgttcatatctaatgaatcgagaaagcttactgcctaccatgaa
agtggacatgctattgttgcactcaacacccagggtgctcaccccattcacaaggcaact
atccttcctcgtgggtctgcccttggaatggtcacgcaacttccctcacaagatgagact
tctattagcaagaaacaactccaggcacgtcttgatgtttgcatgggtgggagggttgct
gaagagctgatctttggggaagacaatgttacaactggggcacgaaatgatcttcatact
gcaacggaacttgcccagtacatggtatcaaactgtgggatgagtgatgctattggtcct
gtgcatgtgaaagagcggccaagtgtagagatgcaatcgaggatagatgctgaggtagtg
aagctcctaagagaggcttatgggcgggtcaagcgtttgcttaagaagcatgagaagcaa
ttacatgcgttagcaaatgcgctgctggagcatgaaacacttactgcggatgagatcaac
aaagtagttcatccataccaagaagagccccagttctccttccaagatgaggagtttgcc
ctcacttaa
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