Panicum virgatum (switchgrass): 120672375
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Entry
120672375 CDS
T07260
Name
(RefSeq) chaperone protein dnaJ 49-like
KO
K09518
DnaJ homolog subfamily B member 12
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120672375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120672375
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP40 / DNAJ
120672375
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Gene cluster
GFIT
Motif
Pfam:
DnaJ
DUF1977
TPR_2
Mito_fiss_reg
Motif
Other DBs
NCBI-GeneID:
120672375
NCBI-ProteinID:
XP_039808669
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Position
5N:complement(37709046..37714540)
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AA seq
376 aa
AA seq
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MEGNKDDAAKCLRIGRGALEAGDRARAVKFLSKAKRLDPSLPIDDLLAPLLSPQDDSPAS
SSSSPPPPPPPQPSAGPAGAGAAEADGLRERKQKGRRREEEEEATGAAREYTVEQLEVVR
QVKKHSRDYYQILGLEKDCTVEDVRKAYRKLSLKVHPDKNKAPGAEDAFKAVSKAFQCLS
DAESRKRYDLVGSDEPVTHHRRASTARAYNGFYEDDFDPDEIFRNFFFGGMAPATTRQFG
QFGTFHFRTGGMHAHGQQNSGGSTVRMLIQLLPVLLLLLLNFLPSSEPVYSLSRSYPYEH
KFQTPRGVAYYVKIPNFEEQYPHQSTERAALERHVERDYYSIITQNCRVELQRRQWGLAY
QTPHCDMLKKFEAAAQ
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggagggcaacaaggacgacgcggccaagtgcttgcgcatcggcaggggcgcgctcgag
gccggcgaccgcgcgcgcgccgtcaagttcctctcgaaggccaagcgcctcgacccgtcc
ctccccatcgacgacctcctcgctccgctcctcagcccccaggacgactcccccgcttcc
tcgtcatcatcgccgccgccgcccccaccgccacaaccttcagcagggccagcgggagca
ggagcagctgaggctgacgggctgagagagaggaaacagaagggcagaaggagggaggag
gaggaagaggcgactggcgctgcgagagagtacacggtggagcagctcgaggttgtgcgc
caggtcaagaagcactccagggactactaccagatcctgggcctcgagaaggactgcacc
gtcgaagacgtgcgcaaggcctaccgcaagctctcgctcaaggtgcaccctgacaagaac
aaggcccctggcgcagaggatgccttcaaggccgtttccaaagccttccagtgccttagt
gatgccgagagtcgtaagcgctatgaccttgttggctcggatgagccagtaacacaccac
aggagggcctccactgcccgtgcatacaatggtttctatgaggatgactttgacccagat
gagatattcagaaacttcttctttggtggtatggcacctgccaccaccaggcagtttgga
cagtttgggacgttccatttcagaactggtggaatgcatgctcatgggcagcaaaactct
ggtggctcaactgtcaggatgcttattcagttgttgccagttctacttctgctgttgctc
aacttcctgccatcctctgagcctgtttactccctctcacgctcctacccatatgagcac
aagttccaaacaccacgtggagttgcatactatgtcaagattcctaattttgaggagcag
tatccacaccaaagcactgaacgagcagcactggagcggcatgttgagagggattattac
tcaataatcacacagaattgcagggtcgaactgcagcgccgccaatgggggttagcatac
cagacaccacactgtgatatgcttaaaaaatttgaggcagcagctcagtaa
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