Panicum virgatum (switchgrass): 120672408
Help
Entry
120672408 CDS
T07260
Name
(RefSeq) phosphoenolpyruvate carboxylase, housekeeping isozyme-like isoform X1
KO
K01595
phosphoenolpyruvate carboxylase [EC:
4.1.1.31
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00620
Pyruvate metabolism
pvir00710
Carbon fixation by Calvin cycle
pvir01100
Metabolic pathways
pvir01200
Carbon metabolism
Module
pvir_M00168
CAM (Crassulacean acid metabolism), dark
pvir_M00170
C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type
pvir_M00171
C4-dicarboxylic acid cycle, NAD - malic enzyme type
pvir_M00172
C4-dicarboxylic acid cycle, NADP - malic enzyme type
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
120672408
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
120672408
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.31 phosphoenolpyruvate carboxylase
120672408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEPcase
PEPcase_2
Motif
Other DBs
NCBI-GeneID:
120672408
NCBI-ProteinID:
XP_039808723
LinkDB
All DBs
Position
5N:complement(57642013..57648736)
Genome browser
AA seq
1071 aa
AA seq
DB search
MSVRRRKPAIASRNVFCRVDLPPPRPPSWPHQKEKPVPGEPCAFLESARLGLGGSSSRSE
RLSKPGGIRWISGAFLFLCQFLGFDLCAFCCRGASGERRGLGETEMARNAVDKATSIDAQ
LRLLAPQKLSDDDKLVEYDALLLDRFLDILQDLHGEDIRETVQECYELAAEYESKLDPKM
LDEIGNVLTSLDPGDSIVITKSFSHMLILANLAEEVQIAYRRRIKLKKGDFVDENSATTE
SDIEETLKRLVHQLKKSPMEVFDALKNQTVDLVLTAHPTQSVRRSLLQKHGRIRDCLSQL
YAKDITPDEKQELDEALQREIQAAFRTDEIRRAPPTPQDEMRAGMSYFHETIWKGVPKFL
RRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYN
AQIEDLMFELSMWRCSDELRVKVDQLHHSSKKDTTKHYIEFWKQVPPSEPYRVILSEVRD
KLYNTRERARHLLASGFSEIPEEATFTDVEQFLEPLELCYRSLCACGDCSVADGNLLDFL
RQVSTFGLSLVRLDIRQESDRHTDVMDAITEYLGIGSYREWPEEKRQEWLLSELNGKRPL
FGPDLPKSDEIADVLETFHVLAELPSDSFGAYVISMATAPSDVLAVELLQRECHVKKPLR
VVPLFEKLADLEAAPAALARLFSVEWYRNRISGKQEVMIGYSDSGKDAGRFSAAWQLYKA
QEELIKVAKLYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPETIHGSLRVTVQGEVIEQS
FGEEHLCFRTLQRFTAASLEHGMHPPISPKPEWRALMDEMAIVATKEYRSIVFEEPRFVE
YFRLATPEMEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKH
VLDKDIRNLQTLQEMYNQWPFFRVTIDLVEMVFAKGDPGIAALYDKLLVSEDLWSFGERL
RANYEETKRLLLQVAGHKDLLEGDPYLKQRLHIRDSYITALNVCQAYTLKRIRDPSFEVK
PRPHLSKDIMDSGKPAAELVKLNTTSEDAPGLEDTLILTMKGIAAGMQNTG
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtccgtcgcaggaaacccgctatagcatcaaggaacgttttttgtcgtgttgat
ctccccccaccccgccccccgtcttggcctcaccagaaagagaagcctgttccaggagag
ccctgtgctttcttggaatccgcgaggttaggtctcggcggatcgtcctctcgcagcgag
aggttgtcaaaacccggtgggattcgatggatttctggggcttttctattcctatgtcaa
ttcttgggttttgatctgtgtgctttctgttgcaggggtgcgagcggggaaaggaggggt
cttggggagacggagatggcgcgcaatgcggtggacaaggcgacgtccatcgacgcgcag
ctgcggctgctagccccgcagaagctctccgacgacgataagctggtcgagtacgacgcc
ctgctcctcgaccggttcctcgacatcctccaggacctgcacggcgaggacatcagggag
acggtgcaagaatgttatgagttagctgctgagtatgaaagtaagcttgaccccaaaatg
ctggatgagattgggaatgtgttgaccagcttggatcctggagactccattgtcataacc
aaatcattctcacacatgcttatcctggcaaacttggctgaggaagtccagattgcatac
cgcaggaggataaaactgaagaagggtgactttgtcgatgaaaactcggcaacaactgaa
tcagacattgaggagacattaaagaggcttgtgcatcagcttaagaagtcccctatggag
gtattcgatgctctgaagaatcaaactgtcgaccttgtcctgactgcacatccgactcag
tcagtcaggaggtcactactccaaaagcatggcaggataagagactgtttaagccaactt
tacgcaaaggacatcactccagatgagaaacaggaacttgatgaagcacttcaaagagag
attcaagctgcctttagaactgatgaaatcaggcgggcacctcctactcctcaggatgaa
atgcgtgctgggatgagttattttcatgagactatatggaagggtgtacccaagttctta
cgtagggttgacactgcccttaagaacattggcataaatgagcgggtgccctataatgct
cctcttattcagttttcttcttggatggggggtgatcgtgatgggaatccaagagtcaca
ccagaggttacaagggatgtgtgcctgttggctagaatgatggctgctaatttgtacaat
gcccaaatagaggaccttatgtttgagttatctatgtggcgctgcagcgatgagttacgt
gtcaaggtcgaccaactacatcattcctccaagaaagatacaacaaaacactatatagaa
ttctggaaacaagttccccccagcgaaccttatcgtgtgattctcagtgaagtcagagat
aaactctacaacacacgtgagagagcacgacatttattagcaagtgggttttctgaaatt
cctgaggaggcaaccttcactgatgttgaacagtttttggagcctcttgagctctgttac
agatctctctgtgcctgcggtgattgctctgttgcagatggaaaccttcttgacttttta
cggcaagtgtccacatttggactatctcttgttagacttgatatcaggcaagaatctgac
cgacatacggatgttatggatgctataactgaatacctcggaatcggatcatatcgtgaa
tggccagaggagaaacgccaagaatggctgctctcagaacttaatggaaagaggccatta
tttggtcctgaccttcccaaatcagatgagattgctgatgttctagagactttccatgtg
ttagctgaacttccttcggacagctttggtgcatatgtaatatctatggctacagctccc
tcagatgttcttgctgttgagctcttgcagcgtgaatgtcatgtgaaaaagccactgaga
gttgtgccattgttcgaaaaacttgcagatcttgaggcggcaccagcagcactagcccgg
ctgttctctgttgagtggtacagaaacaggatcagtggcaagcaggaagttatgatcggg
tattcagattctgggaaggatgctggtcgtttctctgctgcttggcaactgtacaaagct
caagaggaacttatcaaggttgctaagctgtatggggttaagttgactatgtttcacgga
cgaggtgggactgtgggaagaggtgggggccctacccatcttgctatactgtctcaacct
ccagaaactattcatggatcacttcgggtaactgttcaaggtgaagtcatcgagcaatcc
tttggagaggaacatctgtgctttagaaccctgcaacgttttacagctgctagtcttgaa
catggcatgcatcctccaatttcaccaaaaccagaatggcgtgctttaatggatgagatg
gctattgttgccacaaaggaatatcgatcgattgtatttgaagaaccacgctttgttgaa
tatttccgccttgcaacaccagagatggaatatggaaggatgaacattggaagtagacca
tcaaaaagaaagccaagtggaggcattgaatctctgcgtgcaattccttggatctttgct
tggacgcagactcgtttccacctaccagtgtggcttggtttcggtgcagcattcaagcat
gtcttggataaggacatacggaatcttcaaacccttcaagagatgtacaaccagtggccc
tttttcagggtcacaatagatttggttgagatggtgtttgccaaaggtgatcctggtata
gctgctctctatgacaagcttctagtttctgaggatttgtggtcatttggtgagcgcctt
agagccaactatgaagagacaaagcggcttcttctacaggtcgccgggcacaaggatctt
ctggagggtgacccttacctgaagcagaggctgcacatccgtgattcctacatcaccgca
ctgaacgtttgccaggcctacacgctgaagcgcatcagggaccccagcttcgaggtgaag
ccgcggcctcacctgtcaaaggatatcatggactccgggaagccagccgcggagctggtg
aagctcaacaccacgagcgaggacgccccggggctggaggacaccctcattctcaccatg
aagggcatcgccgccggcatgcagaacaccggctga
DBGET
integrated database retrieval system
