KEGG   Panicum virgatum (switchgrass): 120672434
Entry
120672434         CDS       T07260                                 
Name
(RefSeq) signal recognition particle 54 kDa protein 2
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03060  Protein export
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    120672434
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pvir02044]
    120672434
Enzymes [BR:pvir01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     120672434
Secretion system [BR:pvir02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   120672434
  Eukaryotic Sec-SRP protein
   120672434
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N cobW nSTAND_NTPase7 AAA_33 Fe-ADH ResIII nSTAND3 AAA_19 AAA_17 MMR_HSR1 CLP1_P Zeta_toxin AAA_22 MeaB APS_kinase AAA_16 nSTAND_NTPase5 ATP_bind_1 CobN-Mg_chel wHTH-HSP90_Na-assoc
Other DBs
NCBI-GeneID: 120672434
NCBI-ProteinID: XP_039808762
LinkDB
Position
5N:58931203..58935280
AA seq 496 aa
MVLAQLGGSISRALAQMSNATVIDEKVLNDCLNEISRALLQADVQFKMVRDMQTNIKRIV
NLEALAAGTNKRRIMQQAVFTELCNMLDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCTK
YAFYHQRKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK
KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSA
SVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEVFDVKPFVSRLLGMGDW
SGFMDKIHEVVPTDQQPELLQKLSEGSFTLRLMYEQFQNILKMGPIGQVFSMLPGFSAEL
MPKGHEKESQAKIKRYMTMMDSMTDAELDSTNPKLMTESRIIRIARGSGRPVRDVMDMLE
EYKRLAKIWGKMKGLKIPKKGEMSALSRNMNVQHMSKVLPPQMLKQIGGMGGLQSLMKQM
GSKEMSGMFGGMGGDR
NT seq 1491 nt   +upstreamnt  +downstreamnt
atggtgctcgcgcagctgggcgggagcatctcccgcgccctggcgcagatgagcaacgcc
acggtgatcgacgagaaggtgctcaacgactgcctcaacgagatctcgcgcgcgctcctc
caggccgacgtccagttcaagatggtccgcgacatgcagacaaacatcaagcgcatcgtc
aacctggaggcgctcgccgccggcaccaacaagcgccgcatcatgcagcaggccgtcttc
acggagctctgcaacatgttggatcccgggaagccttccttcacacccaaaaagggcaag
ccaagcgttgtcatgttcgttggtctgcaaggttctggtaaaactaccacttgtacaaaa
tatgcattctatcatcagaggaaaggattcaaaccagcactggtttgtgctgatacattt
agggctggtgcttttgatcagctaaaacaaaatgcaacgaaggccaagatccccttttat
ggaagctacatggagtctgatccagtgaaaattgctgttgagggtgtggaaaggttcaag
aaagaaaattgcgatctcataattgtagatacaagtggaaggcacaaacaagaagcagca
ctttttgaggaaatgcggcaagtttcagaagcaactaaaccagacttggtaatatttgtg
atggacagcagtattggtcaggctgcatttgatcaggcacaggcatttaaacaaagtgct
tctgttggtgctgtgattattacgaaaatggatggtcatgcgaaaggaggtggcgctctt
agcgcggtcgcagcaacgaaaagtcctgttatattcattggaactggagaacacattgat
gagtttgaagtttttgatgtgaagccatttgttagtcgcctgttaggtatgggagactgg
tcaggctttatggacaagattcatgaagtagtgcctaccgatcaacaacccgagcttttg
cagaaactgtctgaaggaagctttactctcaggcttatgtatgagcagttccagaacatt
ttgaaaatgggtcctattggccaggtcttctctatgttgcctggattcagtgccgaattg
atgccaaaagggcatgagaaggaaagtcaggccaagattaagcggtacatgacgatgatg
gattccatgacagatgcagagcttgacagcaccaacccaaagctaatgactgagtcacgg
attattcggattgcccgggggtctggccggcctgtcagagatgtcatggacatgctggaa
gagtataagcggcttgctaaaatctggggcaagatgaaggggctcaagatcccaaagaag
ggagagatgagtgcactgtcccgcaacatgaatgtccagcacatgagcaaggtcctcccg
ccgcagatgctgaagcagattggtggcatgggtggactgcagtcactgatgaaacagatg
ggatcaaaggagatgagtggaatgttcggaggcatgggtggtgaccggtaa

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