Panicum virgatum (switchgrass): 120672437
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Entry
120672437 CDS
T07260
Name
(RefSeq) polyubiquitin
KO
K08770
ubiquitin C
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120672437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120672437
Ubiquitin system [BR:
pvir04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
120672437
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Ortholog
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GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
TBK1_ULD
Rad60-SLD_2
Dsc3_N
DUF2604
Ubiquitin_5
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
120672437
NCBI-ProteinID:
XP_039808767
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All DBs
Position
5N:complement(10343531..10345724)
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AA seq
305 aa
AA seq
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MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgttaagaccctcaccggcaagaccatcaccctcgaggttgagtcctcg
gacaccattgacaacgtcaaggctaagatccaggacaaggaaggcatccccccggaccag
cagcggctcatctttgctggaaagcagctcgaggatggccgcactcttgcggactacaac
atccagaaggagtccaccctccacttggtgctcaggcttaggggaggcatgcagatcttc
gtcaagaccctcactggcaagaccatcacgcttgaggtcgagtcttctgacaccatcgac
aacgtgaaggccaagatccaggacaaggagggcatccccccagaccagcagcgtctcatc
tttgctggcaagcagctcgaggatggccgtaccctcgctgactacaatatccagaaggag
tcgaccctccaccttgtgcttaggctcaggggtggaatgcagatcttcgtcaagactctc
actggcaagaccatcactcttgaggtcgagtcatcggacacgattgacaatgtgaaggcc
aagatccaggacaaggagggcattcccccggaccagcagcgtctgatctttgctggcaag
cagctggaggatggccgcacccttgctgactacaacattcagaaggaatccacccttcac
cttgtgctcaggctcaggggtggtatgcagatctttgtgaagaccctcaccggcaagacc
attaccctggaagttgagtcgtctgacactatcgacaatgtgaaggcgaagatccaggac
aaggagggcatccccccggatcagcagcgtctgatttttgctggtaagcagctggaggat
ggccgcaccctggcggactacaacatccagaaggagtccaccctccacctggtgctccgc
ctgcgtggtggccagtaa
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