Panicum virgatum (switchgrass): 120672471
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Entry
120672471 CDS
T07260
Name
(RefSeq) glutamate receptor 2.7-like isoform X1
KO
K05387
glutamate receptor, ionotropic, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pvir04040
]
120672471
Ion channels [BR:
pvir04040
]
Ligand-gated channels
Glutamate (ionotropic)
120672471
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
SBP_bac_3
Lig_chan-Glu_bd
Motif
Other DBs
NCBI-GeneID:
120672471
NCBI-ProteinID:
XP_039808809
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Position
5N:complement(61683138..61711541)
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AA seq
989 aa
AA seq
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MGRLPLRCSSCRSVSSLHLRRLVLVACWCVVAASLLQAAMAQQVRVGVILNLTSPVGQRR
KVGIEMAMEDYYTANPSSRTRVVPRFRDSGGEVVGAASAAVDLIKNEQVQAIIGPPTSAE
AAFVANLGNSTHVPILSSTATSPELFPAQTPFFVRTAANDSFQAAPVAAVLAAFRWHAAV
VVYDDSPYGHGILPALADALQGIGARIMERTAVPVDADDGHIDAVLHRFMAMPTRVFVVH
MNLLLAARLFLRARKAGMMSKDYAWIATDGVGSAVEALGADNIDAMEGLVSLRPYVQVTE
QVRNFSARFRARLRRESPSADIYAHDPTISMLWSYDTAWAVAAAAEAAGVSSPAFQSPQK
STVTDLDRLGVSATGTALLKAVHETTFHGLAGNFKLVDGQLQPPAYEIVNVIGKGARTVG
FWTPEAGISQALDPNAAKGLKPTTVWPGDATSPPKGWVVSPNGKKLRVAVPVKGGFKQFV
DVGNESATGHEANVTGYCIEVFDAVMRKMPYPVGYEYVPIPNSSVSYDQFVNLIPEQRAD
IIVGDVTITASRMAKVDFSMPFTDSGWSMVVAVRPETSTSMWIFLQPLTTSLWLASLAFF
CFTGFVVWAIEHRINPEFRGTPWQQFGLIFYFSFSTLVFAHKEKLESNLSRFVVIIWVFV
VLILTSSYTASLTSMLTVQKLQPTVTDVRELQRSGYNIGYQEGTFIEASLQKLGFDKVRM
KSYSTADEYADALSRGPANGGVAAVFDEIPYLKLFLSQYCDGYAMVGPVYKTDGFGFVFP
LGSPLTPDVSRAVLTLAEGEEMTQIEKKWFGEPGACPIQDGGAAAVGSSNLSFRSFGGLF
LITGVVSGLMLLIYLATFVYHERGKVRVVEEEEGSGSSSVRRLRAWLRHFDQKDLKCPTF
KTWNEESVRDGSQTRRWIDDTVRNGRGDADSAAPAVGEEEAIGMSPLSISAASEMINAGS
SPASELGTSFEQRMQEAPHCGDDTYCGDA
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgggaagactaccactacgctgctcttcttgccgctccgtctcctccctccacctccgc
cgcctcgttctggtggcctgctggtgcgtcgtggcggcgagtttgctgcaggcggccatg
gcgcagcaggtccgcgttggcgtgatcctgaacctgacgtcgccggtcgggcagcggcgg
aaggtcggcattgagatggcgatggaggactactacaccgcgaacccgagttccaggacc
agggtcgtgccgcgcttccgggactccggcggggaggtcgtcggcgccgcgtcggccgcg
gtggacctgatcaagaacgagcaggtacaggcgatcatcgggccgccgacgtcggcggag
gccgcgttcgtggccaacctcggcaacagcacgcacgtccccatcctctcctccaccgcc
acctccccagagctcttcccggcgcagacgcccttcttcgtgcgcaccgcggccaacgac
tccttccaggccgcgccggtcgccgccgtcctcgccgcgttccggtggcacgcggcggtc
gtcgtctacgacgactcgccctacgggcacggaatcctccctgccctcgccgacgcgctc
caaggcatcggcgccaggatcatggagcgcaccgccgtgccggtcgacgccgacgatggc
cacatcgacgcggtgctccaccgcttcatggcgatgccgacgcgcgtgttcgtcgtgcac
atgaacctcttactcgccgcgcggctgttcctccgggccaggaaagccggcatgatgtcc
aaggactacgcctggatcgccacggacggcgtcggcagcgccgtggaagcgttgggcgcc
gacaacatcgacgccatggagggtcttgtcagcctccgtccgtacgtgcaggtgacggaa
caggtcaggaacttctcggcgaggttcagggcgaggctccgccgggagagcccgagcgcc
gacatctacgcccacgacccgaccatttcgatgctctggtcgtacgacacggcgtgggcg
gtcgcggcggcggcggaggccgccggtgtctccagccccgcgttccagtcaccgcagaag
agcacggtgacggacttggaccggctcggcgtttcggccactggaacagcgcttctcaag
gcggtgcacgagacgacattccacgggctcgccggcaacttcaagctcgtcgacgggcag
ctgcagcctccggcctacgagatcgtcaacgtcatcgggaaaggcgcgaggacggtgggg
ttctggacgccggaggccggcatctcgcaggctctcgaccccaacgccgccaaaggtctg
aagcctactactgtttggcctggtgatgcgacgtcgccgcccaaaggctgggtcgtgtcc
ccgaacgggaagaagcttcgtgtcgccgtgccggtgaagggagggttcaagcagttcgtc
gacgtcggcaatgagtcggccaccggacacgaggcaaacgtcacaggctactgcatcgag
gtgttcgacgccgtgatgcgcaagatgccatatccagtgggctacgagtacgttccgatc
cccaacagctcggtttcgtacgaccaattcgtgaacctgattccagaacagagagcggac
atcatcgtcggcgacgtgacgatcacggcgagccggatggcgaaggtggacttcagcatg
ccgttcacggactcggggtggtcgatggtggtggcggtgcggccggagacgagcacgagc
atgtggatcttcctgcagccgctcaccaccagcctctggctcgccagcctcgccttcttc
tgcttcaccggcttcgtcgtctgggccatcgagcaccggatcaaccccgagttccgaggc
acgccgtggcagcagttcggcctcatcttctacttctccttctccaccctcgtcttcgcg
cacaaggagaagcttgagagcaacctgtcgaggttcgtggtgatcatatgggtgttcgtc
gtcctgatcctgacgtcgagctacacggcgagcctgacatcgatgctgaccgtccagaag
ctccagccgacggtcaccgacgtcagggagctccagcggagcggctacaacattgggtac
caggagggtacctttatcgaggcctctctccagaagctcggcttcgacaaggtcaggatg
aagagctacagcaccgcggacgagtacgccgacgcgctgtccaggggcccggccaacggc
ggcgtcgccgccgtgttcgacgagatcccctacctgaagctcttcctgtcgcagtactgc
gacggctacgccatggtcggcccggtctacaagaccgacggcttcgggttcgtgttcccg
ctgggcagcccgctgacgccggacgtgtcgcgggcggtgctgacgctggcggagggggag
gagatgacgcagatcgagaagaagtggttcggcgagccaggcgcgtgcccgatccaggac
ggcggcgccgccgccgtcggctcgtcgaacctcagcttccgaagtttcggcgggctgttc
ctcatcaccggcgtggtgtccggcctcatgctcctcatctacctcgccaccttcgtctac
cacgagcgcggcaaggtccgggtggtggaggaggaggagggctccgggagctcgtcggtg
cggcggctccgcgcgtggctgcgccacttcgaccagaaggacctcaagtgccccacgttc
aagacgtggaacgaggagtccgtcagggacgggagccagacgcggagatggatcgatgac
accgtgcggaacggccgcggcgacgccgacagcgcggcaccggcggtgggcgaggaggaa
gccatcggcatgagccccttgagcatctccgccgcctcagagatgatcaacgccggctcg
tcgccggcgtcggagctcgggacctcgttcgagcagaggatgcaggaggcgccacactgc
ggagatgacacatactgtggagatgcctag
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