Panicum virgatum (switchgrass): 120672499
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Entry
120672499 CDS
T07260
Name
(RefSeq) programmed cell death protein 2-like isoform X1
KO
K14801
pre-rRNA-processing protein TSR4
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120672499
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
120672499
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PDCD2_C
zf-MYND
Motif
Other DBs
NCBI-GeneID:
120672499
NCBI-ProteinID:
XP_039808857
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Position
5N:complement(38251269..38262417)
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AA seq
458 aa
AA seq
DB search
MKVRLPAAGTFKAPFRTFTARKSCSGTLKMESNTNKLQNLHITSNEETYPVPEIDCTDDE
DDEVMEPQVTLGFIDEPEEPEDWHLLLPQHFPNKAGGVPAWLDPVNLPSGKSRSCDFCGE
PLRFVLQVYAPIHSKETAYHRTLFVFMCPSMACLLLDQHEQGKDRAANPKRSVKVFRCQL
AQDNAFYQLEEHEGCSESIESQCAGGPRAQLCHWCGTWKGEKRCSVCRKAYYCSKKHQEL
DWRSSHKNECHQILGAPNDSDSILPDARKVPVFAGAAWPEYTVVDETEKPPRFANCDGNS
SELYVVQGQNEPDHMLSLMDEFEADADNRCWASFLDRISRAPHQVLRYCREAKAKPLWAM
SSGSLATAAIPSCIYCSGPLRYEFQIMPQLLHFFHVENKPDSLDWATIVVFTCQGSCDRN
INYKEEFVWVQLYPTTATRYRSSGYQSPSTNKILRSDL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtaaggctgcctgcagcggggacctttaaagctcccttcaggacttttaccgca
cggaagagctgcagcggcacactaaagatggaatccaacaccaacaagcttcaaaacctc
catatcacctccaatgaggaaacatatcctgttcccgagattgattgcacggatgatgaa
gatgacgaggtcatggagcctcaagtaacattaggtttcatagatgagcctgaggaacca
gaggactggcatcttcttctcccacaacacttccccaacaaagctggcggtgttccggcc
tggcttgatcctgtgaatttgccatcaggcaagtcgaggagctgtgacttctgtggcgag
ccactgcgctttgttctccaggtttatgcaccaattcactcgaaagaaacagcctaccac
cggacattgtttgtgttcatgtgcccttcaatggcatgcttactcctagaccagcatgaa
caggggaaggacagagctgcgaatcctaaaagaagtgtgaaggttttccggtgccagctg
gcccaggacaatgcattttatcaacttgaagaacatgaaggatgcagtgaatccattgag
tcacagtgtgctggaggaccacgtgctcagctttgccattggtgtggtacatggaaaggt
gaaaaaagatgtagcgtctgtagaaaagcatactactgttccaagaagcatcaggaattg
gattggcgtagcagtcacaagaatgaatgtcatcaaattctaggtgcacccaatgattct
gattctattttgccagatgcaaggaaagttccagtatttgctggcgcggcatggcctgaa
tatacggtggttgatgaaactgaaaagcctccccgttttgctaattgtgatggcaatagc
tcagaattgtatgtggtgcaaggacaaaacgaaccagatcacatgttgtctttgatggat
gagtttgaggctgatgctgacaacagatgctgggcatcttttctagaccgcatctcaaga
gctccacatcaagtgctgaggtactgcagggaggcaaaagcaaaacctctttgggcgatg
tcatctgggtctctggccactgcagctatcccgtcatgcatctactgtagcggtccactt
cgctatgagtttcagataatgccacagctgctccatttcttccatgttgaaaataagccc
gactctcttgattgggcaacaatagttgtgtttacatgtcaagggtcctgtgatcgaaat
atcaattacaaggaagaatttgtatgggttcagttatacccaactactgcgacaagatac
cgcagttctggttaccaatctccttcaacgaataagattctccggtccgatctatag
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