Panicum virgatum (switchgrass): 120672539
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Entry
120672539 CDS
T07260
Name
(RefSeq) protein DEK-like isoform X1
KO
K17046
protein DEK
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120672539
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
120672539
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEK_C
Motif
Other DBs
NCBI-GeneID:
120672539
NCBI-ProteinID:
XP_039808942
LinkDB
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Position
5N:69169760..69176429
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AA seq
509 aa
AA seq
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MASDDAKFASPPAAADPPAADAEDAAPADAKEETTPQQPEKKRGRRKKGEAQAEAAKKTP
TPRKSGPAAERPSRERKTVERYSELAPRVTPVKKSPAILQGSGTKLKDIPNVSFKLSKRK
ADDILQSLHVLMYGKKSNVHFLKRNISQFSGFVWTDNQEKHRTKIKEKLDKFNKEKLLDF
CEILDISVAKATTKKEEVSAKVLEFLESPFITRDVVLTDNKKGKKRGRRPKGSGEATSEG
ASEEKVILSDAKEKRKRGKKQAAEAGKENDDEEDAGSKDTSTGEEGDEESEANDHAVSDD
EPDEPPAKKRSTDVNQVKKETGSNAKEKDTPRKRVSTKPVKGASKPSQDIKDEPDIEVKK
AGKRAKSSKETDAPQDSNKVNKVPKSKKVDGKESQNNKVAKTSSKNKGKGKGGAEAKPVP
TIEQLHAVVTRILKEVDFNTATLADILRQLGTHFEVDLMDRKAEVKCIIEDVINNMSDDD
GGEEDSEDEAEDNGKEEKVKSDPDGGEEK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgacgacgccaagttcgcctcccctcccgccgccgcggatccgccggccgcc
gacgccgaggacgccgccccggcggacgccaaggaggagaccaccccgcagcagccggag
aagaagcggggccggaggaagaagggggaggcgcaggcggaggcggccaagaagacgccg
acgcccaggaagtccggccccgcggccgagcgcccgtccagggagaggaagacggtcgag
aggtactcggagctcgccccgcgcgtcacgcccgtcaagaagtcccccgctattctccag
ggctctggaaccaagctgaaagacatacccaatgtttccttcaaactatcaaagagaaag
gcagatgatatcctccaaagccttcatgttctaatgtatgggaagaaatcaaatgtccac
tttttgaagagaaacatatctcaattttctggttttgtttggacggataatcaagaaaaa
cacaggacaaaaataaaggaaaagcttgacaaatttaacaaggagaagttgctcgacttt
tgtgaaatactggatatttctgttgcaaaagcaactacaaagaaggaagaagtttctgcc
aaagtcttggagtttttggagtccccttttattactagggatgttgttctcactgataac
aagaaagggaagaaacgtgggaggagacctaagggaagtggtgaggcaacttctgaaggt
gcttctgaagagaaggtaatcctatctgatgctaaggagaaaaggaaaaggggcaagaaa
caagcagctgaagctgggaaagagaatgatgatgaggaagatgctggttctaaagataca
tcaacaggagaggaaggtgatgaggaatctgaagcaaatgatcatgctgtgagtgatgat
gaacctgatgagcctccagcaaagaaaaggtcaacagatgtaaatcaagttaagaaggaa
actgggtctaatgcaaaggaaaaggacacaccacgaaaaagggtttctacaaaacctgtg
aaaggtgcttcaaagccttctcaagacattaaagatgagcctgatatagaggtcaaaaag
gctggcaagagagcaaagagttctaaggaaactgatgctccacaagattcaaataaggtg
aacaaggtacccaaatcaaaaaaggttgatggaaaagagagccaaaacaataaggtggct
aagacatccagtaaaaataaaggtaaaggcaagggtggtgctgaggctaagcctgtccca
actattgaacagctgcatgctgttgttaccagaattttgaaggaagttgacttcaacacg
gcaactttggctgatattctcagacaattagggacccattttgaggtggacctcatggac
agaaaagctgaagtgaagtgcatcattgaggatgtaataaataatatgtctgatgatgat
ggtggtgaggaagactcagaagatgaagctgaagacaatggtaaggaagagaaggtaaag
agtgatcctgatggaggtgaggagaagtga
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