Panicum virgatum (switchgrass): 120672568
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Entry
120672568 CDS
T07260
Name
(RefSeq) WD repeat-containing protein 53-like isoform X1
KO
K24748
WD repeat-containing protein 53
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
120672568
Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
120672568
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_EIPR1
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_RFWD3
WD_LRWD1
DNA_pol_B_exo1
Motif
Other DBs
NCBI-GeneID:
120672568
NCBI-ProteinID:
XP_039808985
LinkDB
All DBs
Position
5N:complement(2942300..2946562)
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AA seq
392 aa
AA seq
DB search
MSDTESAAEAVPAAAPAAAAERKPRRLRGHKKGAVTCCVASSARPGVVASAGEDGCLCWF
DLRTKDVLLTIEAANKPISSVCFKPGNEDFVYASAGNEILSFDVRMGPQSKPLETYNYNR
DEINQIAVTSKGYLAAADDSGDVKIVSTIQKCLYKRLREAHTSICSTVQFIPWRPWTAIT
GGLDSKLAAWDFSKGRTLFSIDYGSPELQNGSSSGSAGQCFNPAFVHSLAVSEEGILGGL
YKVCAVARGDGAVDVVDLEYELAPAKSKGPPRTATSTMSSKRTEPGDESSNQGQVKRIHL
DFTLGGHTAAVSCVAFSAFGEKGKFLVSGGNDASVKIWDWSRGFSSERNSDAQLVLDIDV
KKKVNWLCTTPTDSDNLIVCNTSKVVKVYNFR
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacactgaatcggcggcagaggcggtccctgcggcagcgccggcggcagcggcg
gagcggaagccccggaggctgcgggggcacaagaagggcgccgtcacctgctgcgtcgcg
tcctccgcccgcccgggcgtcgtcgcgtccgccggcgaggatggatgtctttgctggttt
gatctgcgcaccaaagatgtgcttttgaccattgaggcagcaaataagccaatttcttct
gtgtgctttaaacctggaaatgaagactttgtgtatgcctctgctggaaatgaaatattg
tcctttgatgttcgtatgggacctcaatcaaagccattagagacatataactacaataga
gatgaaatcaatcagattgctgtcacctctaaaggttatctcgctgctgcagatgacagt
ggggatgttaagattgtcagtaccattcagaaatgcctgtataaaagattgagggaagcc
cacacaagtatttgcagcactgtacaattcattccttggagaccttggacagcaatcact
ggtggccttgactcgaagcttgctgcgtgggatttttccaaagggcgaacactattttct
attgattacggatcacctgaattgcaaaatggcagttcttccggtagtgcagggcaatgt
ttcaaccctgcttttgttcattctctagcagtttctgaagagggcattttgggtgggttg
tacaaagtttgtgctgttgcaagaggggatggtgctgttgatgtagttgatctcgaatat
gaactggcacctgctaaatcaaaaggacctcctcggacagcaacttcgacaatgagttca
aaaagaactgaacctggagatgaaagtagtaatcaaggtcaagtgaaaaggatccatctt
gatttcacattgggtggccatactgcagctgtgtcttgtgtagcattttcagcatttggt
gagaaaggtaagttccttgtttcaggcggcaatgatgcatcagtgaagatatgggattgg
tccagaggattttcttctgaaagaaacagtgatgctcaattggtattggatattgatgtg
aagaaaaaggtaaattggttgtgtactaccccaaccgattcagataatctgattgtgtgc
aacacatccaaggtggtcaaagtatacaattttcggtag
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