Panicum virgatum (switchgrass): 120672587
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Entry
120672587 CDS
T07260
Name
(RefSeq) AP-4 complex subunit sigma
KO
K12403
AP-4 complex subunit sigma-1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120672587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120672587
Membrane trafficking [BR:
pvir04131
]
Endosome - Golgi transport
Others
AP-4 complex
120672587
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clat_adaptor_s
Intu_longin_1
Motif
Other DBs
NCBI-GeneID:
120672587
NCBI-ProteinID:
XP_039809014
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All DBs
Position
5N:complement(22760740..22769323)
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AA seq
143 aa
AA seq
DB search
MTIRFVLFVNKQGQTRVAQYYEHLSLDERRALEGEIVRKCLARTDQQCSFVEHRNYKVVY
RRYASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVM
NGCIVETSKQNILAPIQLMEKTS
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atgacgatccggttcgtgctgttcgtgaacaagcagggccagacgcgggtggcgcagtac
tacgagcacctctccctcgacgagcgccgcgccctcgagggcgagatcgtccgcaagtgc
ctcgcccgcacagaccagcagtgctcgttcgtggagcaccggaactacaaggtcgtgtac
aggcgctacgcctccctcttcttcctcgtcggcgtcgacaacgatgagaatgagttagct
atccttgaattcatacatcttttggtggagactatggatcgccactttggcaatgtgtgc
gagcttgacatcatgttccacctggagaaggtgcacttcatgctggaagagatggtgatg
aatggttgcattgtggagacaagtaaacagaacatcttggcaccgatccagcttatggag
aaaacttcttga
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