Panicum virgatum (switchgrass): 120672606
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Entry
120672606 CDS
T07260
Name
(RefSeq) U3 small nucleolar ribonucleoprotein protein MPP10-like
KO
K14559
U3 small nucleolar RNA-associated protein MPP10
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120672606
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120672606
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120672606
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120672606
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
120672606
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mpp10
Motif
Other DBs
NCBI-GeneID:
120672606
NCBI-ProteinID:
XP_039809035
LinkDB
All DBs
Position
5N:complement(23685266..23690676)
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AA seq
560 aa
AA seq
DB search
MSVHKNSCETAFAHMEAADKGEQALQLLRDADPALFLSPSTDLSVAARVASQHIYSSLAP
LCPAQPPPLPTLLADAAFDAEQIWSQIEHLARPILPHLRRQLRHLEQQPPSQPQAALPVE
TPADAEEELSEDRQDSEMDGLKELKEIDDDEDLGDDNDDDDDDDDAEEEEEEEEEEEERG
GFLKGLEDQFLKIDEMAEFLDKGDEEEYGSGANQGEKKARKNWMEESDDEGEEDIDVDDD
EGEDDDDDGQLDLEDFEDDDEEGKGEDGGGIMYKDFFMKGHNQQVKQRGGSTKKVQFKDE
AHETELGGSEINDGNEKQGLSTHEKELLKMRAKIEQMEQANLEPGTWTMQGEVTASSRPK
NSALEVDLDFEHNVRPAPVITEEITASLEEMIKKRIAEGHFDDVEKPSLILSKAPKERKE
LDESKSKKGLAELYEDDYAQKAGIAPAPLSISDELKKEANTLFKRICLKLDALSHFHFAP
KPVIEDMSVQANVPALAMEEIAPVAVSDATMLAPEEIFEGKGDIKEEGELTQAERKRRRA
NKKRRYAGSHKERPAKLQKD
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgcataagaacagctgtgagacagctttcgcccacatggaggcagcagacaag
ggtgagcaggcgctgcagctgctacgggatgcagacccagctctcttcctctccccatcc
acggacctctctgtcgccgcccgtgtggcctcacagcatatctactcctcactggcaccg
ctctgccctgcgcagccgcccccactccccaccctccttgcagatgcggcctttgatgcc
gagcagatttggtcccagatcgagcatcttgcccgtccaatcctcccccacttgcgccgc
cagctccgtcaccttgagcagcagcccccgtcacaaccacaggcagctcttcccgtggag
acacctgctgatgctgaggaggagctgtcagaggacagacaggatagtgaaatggatggg
ttgaaggagctgaaggagatagatgatgatgaggatttgggagacgacaacgacgacgac
gacgatgatgatgatgcggaggaggaggaggaggaggaggaggaggaggaggagagagga
gggtttttgaaaggtttggaagaccagttcctgaagatagatgagatggcggagttcctg
gataagggggatgaagaggagtatggcagtggtgccaaccaaggagagaagaaggcaaga
aaaaactggatggaggagagtgatgatgagggtgaggaggacatagatgttgatgacgat
gagggtgaagatgatgacgatgacggccaattggatttggaagattttgaggatgatgat
gaagagggcaaaggagaagatggtggaggtataatgtacaaagatttttttatgaaaggc
cataaccagcaagtcaaacagagaggtggttccacaaagaaagttcaattcaaggatgaa
gcacatgaaactgaacttggtggcagtgagatcaatgatggaaatgaaaaacagggtctc
tcaacccatgaaaaggagcttctgaagatgcgtgctaaaatagagcaaatggagcaagct
aatcttgaacctggtacttggaccatgcagggagaggttactgcttcaagcaggcccaaa
aacagtgccctagaagtggaccttgattttgagcacaatgtaagacctgccccagtaatc
actgaagaaatcacagcttctcttgaagagatgataaagaaaagaattgcagagggtcat
tttgatgatgttgagaagccttctctcattctatctaaagctcccaaggagcgtaaggaa
ctggatgaaagtaagagcaaaaagggtcttgctgaactgtatgaggatgattatgcacaa
aaagcaggcattgcacctgcccctctatctatttcagatgaactaaagaaagaggcaaat
actttatttaagaggatatgcttgaagttggatgcgctatcacatttccacttcgctcca
aagccggtcattgaagatatgtctgtacaagctaatgtgccagccttagcaatggaagag
attgcacccgtagctgtttctgatgctacgatgctagctcctgaagaaatatttgaagga
aaaggcgatattaaggaagagggggaacttacacaggctgagcgtaaaagaagaagagcc
aacaagaaaaggagatatgcaggatcacacaaggagaggccagctaagttgcagaaagat
tag
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