Panicum virgatum (switchgrass): 120672615
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Entry
120672615 CDS
T07260
Name
(RefSeq) tubulin beta-4 chain-like
KO
K07375
tubulin beta
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04145
Phagosome
pvir04517
IgSF CAM signaling
pvir04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120672615
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120672615
09142 Cell motility
04814 Motor proteins
120672615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120672615
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120672615
04147 Exosome [BR:
pvir04147
]
120672615
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
120672615
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
120672615
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120672615
Exosomal proteins of colorectal cancer cells
120672615
Exosomal proteins of bladder cancer cells
120672615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
Misat_Tub_SegII
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
120672615
NCBI-ProteinID:
XP_039809047
LinkDB
All DBs
Position
5N:60681072..60684356
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AA seq
499 aa
AA seq
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MPAAGRCLRRLRLFNPALPTPHSPRPSSTSPIYLAPSTPVSSPFGSSPTSAKMREILHIQ
GGQCGNQIGAKFWEVVCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRFVPRAVLMDL
EPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCD
CLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLS
VHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNS
DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHG
RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPMGLSMASTFI
GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA
TAEEEGEYDEEEEMHPDDL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgccggccgcaggccgctgcctccgccgcctacggctatttaaccccgcactgccgacg
ccgcactcgccccgcccctcctctacctccccgatctatctcgctccctcgacgccggtc
tcctcgccgtttggatcatctcctacatcggcgaagatgagagagatcttgcacatccag
ggtgggcaatgtggcaaccagattggtgccaagttctgggaggtggtgtgtgatgagcat
ggcattgaccctactgggcggtacactggcacctctgacctgcagttggagcgtgtcaat
gtctactacaatgaggcgtcctgtggccgctttgtgccccgtgctgttctcatggacctt
gagcctgggacaatggacagtgtccgcactggaccatatgggcagatcttccgccctgac
aactttgtgtttgggcaatctggagctggtaacaactgggctaagggccattacactgaa
ggtgctgagctcattgactctgttctggatgttgtgaggaaggaagctgagaactgtgac
tgtctgcaaggattccaagtatgccactctcttggtggtggaactggatctggtatgggt
acactgttgatctcaaagatcagggaggagtaccctgaccgcatgatgctgacattctca
gttttcccctcaccaaaagtatctgatactgtggttgagccatacaatgccactctttca
gtccatcagttggttgagaatgccgatgagtgcatggttcttgacaatgaggccctctat
gacatttgcttcaggactctcaagctgaccacgcctagctttggggatttgaaccatttg
atctctgccaccatgagtggagtcacctgctgccttaggttccctggtcagcttaactct
gatctccggaagctggcagtgaacctgatcccctttccccgtctacactttttcatggtt
ggcttcgccccactgacatcccgtggctctcagcagtaccgtgccctcactgtccccgag
ctcacacagcagatgtgggattccaagaacatgatgtgtgctgctgaccctcgccacggg
cgttacctcactgcctcagccatgttccgtgggaagatgagcaccaaggaggttgatgag
cagatgatcaatgtccagaacaagaactcgtcctacttcgtggagtggatccccaacaac
gtgaagtccagcgtgtgtgacatcccacctatgggcctgtccatggcgtccaccttcatc
ggcaactccacctccatccaggagatgttccggagggtgagcgagcagttcacggccatg
ttcaggaggaaggctttcttgcactggtacacaggcgagggcatggacgagatggagttc
actgaggctgagagcaacatgaacgacctcgtgtcagagtaccagcagtaccaggatgcg
acagctgaagaggagggcgagtacgacgaggaggaggagatgcaccccgacgacctgtga
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