KEGG   Panicum virgatum (switchgrass): 120672615
Entry
120672615         CDS       T07260                                 
Name
(RefSeq) tubulin beta-4 chain-like
  KO
K07375  tubulin beta
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04145  Phagosome
pvir04517  IgSF CAM signaling
pvir04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    120672615
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120672615
  09142 Cell motility
   04814 Motor proteins
    120672615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pvir03036]
    120672615
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pvir04812]
    120672615
   04147 Exosome [BR:pvir04147]
    120672615
Chromosome and associated proteins [BR:pvir03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     120672615
Cytoskeleton proteins [BR:pvir04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    120672615
Exosome [BR:pvir04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   120672615
  Exosomal proteins of colorectal cancer cells
   120672615
  Exosomal proteins of bladder cancer cells
   120672615
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 Misat_Tub_SegII Tubulin_2
Other DBs
NCBI-GeneID: 120672615
NCBI-ProteinID: XP_039809047
LinkDB
Position
5N:60681072..60684356
AA seq 499 aa
MPAAGRCLRRLRLFNPALPTPHSPRPSSTSPIYLAPSTPVSSPFGSSPTSAKMREILHIQ
GGQCGNQIGAKFWEVVCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRFVPRAVLMDL
EPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCD
CLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLS
VHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNS
DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHG
RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPMGLSMASTFI
GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA
TAEEEGEYDEEEEMHPDDL
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgccggccgcaggccgctgcctccgccgcctacggctatttaaccccgcactgccgacg
ccgcactcgccccgcccctcctctacctccccgatctatctcgctccctcgacgccggtc
tcctcgccgtttggatcatctcctacatcggcgaagatgagagagatcttgcacatccag
ggtgggcaatgtggcaaccagattggtgccaagttctgggaggtggtgtgtgatgagcat
ggcattgaccctactgggcggtacactggcacctctgacctgcagttggagcgtgtcaat
gtctactacaatgaggcgtcctgtggccgctttgtgccccgtgctgttctcatggacctt
gagcctgggacaatggacagtgtccgcactggaccatatgggcagatcttccgccctgac
aactttgtgtttgggcaatctggagctggtaacaactgggctaagggccattacactgaa
ggtgctgagctcattgactctgttctggatgttgtgaggaaggaagctgagaactgtgac
tgtctgcaaggattccaagtatgccactctcttggtggtggaactggatctggtatgggt
acactgttgatctcaaagatcagggaggagtaccctgaccgcatgatgctgacattctca
gttttcccctcaccaaaagtatctgatactgtggttgagccatacaatgccactctttca
gtccatcagttggttgagaatgccgatgagtgcatggttcttgacaatgaggccctctat
gacatttgcttcaggactctcaagctgaccacgcctagctttggggatttgaaccatttg
atctctgccaccatgagtggagtcacctgctgccttaggttccctggtcagcttaactct
gatctccggaagctggcagtgaacctgatcccctttccccgtctacactttttcatggtt
ggcttcgccccactgacatcccgtggctctcagcagtaccgtgccctcactgtccccgag
ctcacacagcagatgtgggattccaagaacatgatgtgtgctgctgaccctcgccacggg
cgttacctcactgcctcagccatgttccgtgggaagatgagcaccaaggaggttgatgag
cagatgatcaatgtccagaacaagaactcgtcctacttcgtggagtggatccccaacaac
gtgaagtccagcgtgtgtgacatcccacctatgggcctgtccatggcgtccaccttcatc
ggcaactccacctccatccaggagatgttccggagggtgagcgagcagttcacggccatg
ttcaggaggaaggctttcttgcactggtacacaggcgagggcatggacgagatggagttc
actgaggctgagagcaacatgaacgacctcgtgtcagagtaccagcagtaccaggatgcg
acagctgaagaggagggcgagtacgacgaggaggaggagatgcaccccgacgacctgtga

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