KEGG   Panicum virgatum (switchgrass): 120672622
Entry
120672622         CDS       T07260                                 
Name
(RefSeq) BTB/POZ domain and ankyrin repeat-containing protein NPR2-like
  KO
K14508  regulatory protein NPR1
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04075  Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04075 Plant hormone signal transduction
    120672622
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvir04121]
    120672622
Ubiquitin system [BR:pvir04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Adoptor and target recognizing subunit (BTB)
     120672622
SSDB
Motif
Pfam: NPR1_like_C Ank_2 Ank DUF3420 Ank_3 Ank_4 BTB Ank_5 T2SSS_2
Other DBs
NCBI-GeneID: 120672622
NCBI-ProteinID: XP_039809057
LinkDB
Position
5N:58462300..58466336
AA seq 620 aa
MEPSSSITFASSSSYLSNGSSPCSVALPPPGPPQAPPLTAGEGWGSGGAAGGSGSSVEAV
SLNRLSKNLEQLLLDRDLDCSDADVEVPDGGPPVAVHRCILAARSAFFYDLFAARGRGGA
ARGDVAAAAAGGTGEGAASGRPRYKMEELVPGGRVGREAFQAFLGYLYTGKLRPAPLDVV
SCADPVCPHDSCPPAIRFAVEIMYAAWTFKIPELISLYQRRLLNFVDKTLVEDVIPILQV
ASHSELTQVLDKCIQRIARSDLDDISLDKELSPEVVEKIKQIRKNSQTADDDASISDPVH
EKRVRRIHRALDSDDVELVKLLLNESEITLDDANALHYAASYCDSKVVSELLDLGLANLN
LKNSRGYTALHLAAMRREPAIIMCLLNKGATVSQLTADGRSAIGICRRLTRAKDYNTKME
QGQESNKDRLCIDILEREMMRNPMSVEDAVTSPLLADDLHMKLLYLENRVAFARLFFPAE
AKVAMQIAQADTTEEFGGITVPGTSGKLREVDLNETPAIQSKRLRSRVDALMKTVELGRR
YFPNCSQVLDKFLEDDLPDGGLDKFYLQRGTPDEQKVKRMRFSELKEDVQKAFSKDKADN
SMISGLSSLSCSPPQKVAKK
NT seq 1863 nt   +upstreamnt  +downstreamnt
atggagccgtcgtcgtccatcacgttcgcgtcctcgtcgtcgtacctgtccaacgggtcc
agcccctgctccgtcgcgctcccgccgccggggccgccccaggctcccccgttgaccgcc
ggcgaggggtggggcagtgggggcgctgcgggagggagcggcagcagcgtggaggcggtc
agcctgaaccggctcagcaaaaacctcgagcagctgctcctcgaccgggacctcgactgc
agcgatgccgacgtcgaggtgcccgacggtgggccgcccgtcgccgtccaccgctgcata
ctcgccgcgcgcagcgccttcttctacgacctcttcgccgcgcgcggccgcggaggcgca
gcgcgcggtgatgtcgccgccgccgccgccggagggacgggggagggggctgccagtggc
aggccgcggtacaagatggaggagctcgtgcccggcggccgcgtggggcgcgaggccttc
caggcgttcttgggctatctgtacaccggcaagctccggccggcaccgctcgatgtggtg
tcttgtgctgaccccgtgtgccctcacgactcgtgcccgccggccatcaggttcgccgtt
gagatcatgtacgcggcgtggaccttcaagatccccgagctcatttcgctctaccagcgg
cggcttcttaactttgtagacaagactctagtggaagatgtcattcctattctgcaagtt
gcttcccactcagagctgactcaagtgctcgacaaatgtattcagaggattgccagatca
gatcttgatgatatatctttggataaggagctctctccagaagttgtcgagaagataaaa
cagattcgtaaaaattcacaaactgctgacgatgacgcctccatttcggaccctgtgcat
gagaaaagagtcagaaggatccacagagcactcgactctgatgatgttgagcttgtgaag
ttgcttcttaatgagtctgagatcacattagatgatgccaatgcattgcactatgcagct
tcttactgtgattctaaagttgtctcggagttgttagacttggggctggctaacttgaat
ttgaagaatagccgtggatacacagcactccacttggctgctatgaggagagaaccagct
atcattatgtgcctccttaacaaaggggcaactgtatcgcaactgacagctgatggccga
agcgcaattggtatttgtcggaggttaacaagagcaaaagactacaatacaaagatggag
cagggtcaagagtcaaacaaagataggttgtgtatagatattctagagcgggagatgatg
cgaaatcctatgtcggtagaagatgctgtcacctcacctttgttagccgatgatcttcac
atgaagcttctctacctggaaaacagagttgcatttgctagactgttctttcccgctgaa
gcgaaggtcgccatgcaaatcgcgcaagcagacaccacagaagaatttggtggtattact
gtaccaggtacttctggaaaactgagggaagtcgacctgaacgaaacaccagccatacaa
agcaaaagactccgttcaagggtggatgcactgatgaaaacagtggagctgggccggcgg
tacttcccgaactgctcgcaagtgctggacaagttcctggaggacgacctgcctgacggg
gggcttgacaagttctacctccagaggggcacccccgacgagcagaaggtgaagaggatg
cgcttcagcgagctgaaggaggacgtgcaaaaggcgttcagcaaggacaaggccgacaac
agcatgatctccggcctgtcgtcgttgtcgtgctcgccgccccagaaggtcgccaagaag
tga

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