Panicum virgatum (switchgrass): 120672635
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Entry
120672635 CDS
T07260
Name
(RefSeq) probable serine/threonine-protein kinase At1g54610 isoform X1
KO
K08819
cyclin-dependent kinase 12/13 [EC:
2.7.11.22
2.7.11.23
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120672635
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
120672635
2.7.11.23 [RNA-polymerase]-subunit kinase
120672635
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: CMGC group
CDK family
120672635
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GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
APH
Seadorna_VP7
Motif
Other DBs
NCBI-GeneID:
120672635
NCBI-ProteinID:
XP_039809078
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Position
5N:24573147..24579236
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AA seq
559 aa
AA seq
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MGCVFGRAAASSPAAPTRKRGKERASPQPTAAAEAGSPSTAADGGGRPRRRLGGRRAAGP
RQGCVPAAAAAEQLAAGWPPWLVVVAGEALRGWAPRRADTFEKLNKIGSGTYSNVYRARD
TVSGRIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFE
YMEHDLAGLAASPDIKFTLPQIKCYMQQLLSGLEHCHDNNVLHRDIKGSNLLLDNNGILK
IADFGLATFFDPRHKQPMTSRVVTLWYRPPELLLGATDYGVDIDLWSAGCILAELLNGKP
IMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQPYKCCIRETFKDFPASALP
LVETLLAIDPAERQTATAALHSDFFSTEPYACDPSSLPTYPPSKEMDAKLRDEEARRLRA
AAKAKGEAKRTRPRDRSHRARPAPEANAEIQANLDQRRRMITHANAKSKSEKFPPPHQDG
AMGNPLGSCRRMEPMFEHQDASFSTVVPIEKGTSQTWSGPLFDPSALGQSRRKKQTTLDA
KAAAYSKQLQKEKAGIRAR
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcgtcttcggccgcgcggccgcgtcgtcccccgcggcgccgacgaggaagagg
ggcaaggagagggcgtccccgcagcccacggcggcggccgaggccgggtcgccctccacg
gccgccgacgggggcgggagaccgcggcggcggctcgggggccgcagggcggcggggcca
aggcaggggtgcgtccccgcggccgccgcggcggagcagctcgccgcgggctggccgcca
tggctcgtcgtcgtcgcgggggaggccctccgcgggtgggccccgcgccgcgccgacacc
ttcgagaagctcaataagattggatcgggcacgtacagcaacgtgtaccgcgcgagggac
accgtctccggccgcatcgtggctcttaagaaggttcggttcgacaacctcgagccggag
agcgtcaagttcatggccagggagatactgatcctgaggaggctcgatcaccccaatgtg
atcaaattggagggcttggtcacttccaggatgtcatgtagcctgtaccttgtcttcgag
tacatggagcatgaccttgctgggctcgcagcaagccctgatatcaaattcacgttgcct
cagataaaatgttacatgcagcagctgttatcagggcttgagcattgtcatgacaacaat
gtattgcaccgggatatcaaggggtcaaacttgctgttggataataatgggattcttaag
attgcggattttgggctggcaacattctttgacccgcggcacaagcagccaatgacaagc
cgggtggtcacgctatggtatcggccgccagaattgttacttggcgcaactgattatggt
gtagacattgatttgtggagtgctgggtgcattctggcagagctcttaaatgggaagccc
ataatgcctggacgcactgaggtggagcagttgcacaagatttttaagctatgtggctcc
ccttcagaggagtattggaagaagtctaaactaccacatgcaacgatattcaaaccccag
cagccctataaatgttgcatcagggagacatttaaagattttcctgcatcggctctgcca
ttggttgaaactttgcttgcaattgatccagctgagcgtcaaactgcgacagctgcattg
cacagtgattttttttcaaccgagccttatgcttgtgatccttcaagcctgccaacttat
cctccaagcaaggagatggatgccaagttgagagatgaggaagctagaaggctacgagct
gctgcaaaggctaaaggagaagcaaaaaggacgcgaccacgtgatcgatctcatagggct
agaccagcaccagaagctaatgcagagattcaagcaaacttagaccagaggcgacggatg
ataacccatgccaatgcaaagagcaaaagtgagaagttccctccgccacatcaggatgga
gcaatgggtaatccgctgggatcctgtcgtcgtatggagcctatgttcgagcaccaggac
gcttccttcagtacagtagtccccattgagaaggggacctcacaaacatggtcgggaccc
ttgtttgatccatcggctcttgggcaatcgagacggaagaagcagacaaccctagatgct
aaggctgcagcttactcaaagcagctccaaaaagaaaaggcagggatacgagccagataa
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