Panicum virgatum (switchgrass): 120672655
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Entry
120672655 CDS
T07260
Name
(RefSeq) 2-hydroxyacyl-CoA lyase
KO
K12261
2-hydroxyacyl-CoA lyase [EC:
4.1.2.63
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120672655
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.63 2-hydroxyacyl-CoA lyase
120672655
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GFIT
Motif
Pfam:
TPP_enzyme_M
TPP_enzyme_C
TPP_enzyme_N
CO_dh
PRCH
Motif
Other DBs
NCBI-GeneID:
120672655
NCBI-ProteinID:
XP_039809113
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Position
5N:complement(1292394..1296365)
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AA seq
570 aa
AA seq
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MAAETVDGSALAGLALAAAGARHMFGVVGIPVTSLASRAAAAGVRFLAFRNEQSAGYAAA
AYGFLTGSPGLLLTVSGPGCVHGLAGLSHATANAWPLLMVSGSCDQADAGRGDFQELDQI
AATKPFAKLAVKATTIADIPRLVFQALAAAVSGRPGGCYLDIPSDVLHQTLPQSEAADLI
AAAKADSAASNPSPPNQKPLDEAIGKAADLLRRAERPLVVIGKGAAYARAEEAIRKLVDT
TGIPFLPTPMGKGVVPDSHPLSATAARSLAIGQCDVALVVGARLNWLLHFGEPPKWSKDV
KFILVDVCEEEIELRKPHVGIVGDAKRVIELINREIKDDPFCLARSNPWVEAITKKAKDN
VLKMEAQLAKDVVPFNFLTPLRIIRDAILAEGSPAPIVVSEGANTMDVGRAVLVQNEPRT
RLDAGTWGTMGVGLGYCIAAAVAEPERLVVAVEGDSGYGFSAMEVETLVRYQLPVVVIVF
NNNGVYGGDRRSPDEITGPFKDDPAPTSFVPAAGYHKMMEAFGGKGYLVETPDELKSALS
ESFRARKPAVINCIIDPYAGAESGRMQHKN
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgagaccgtcgacggcagcgcgctcgcggggctcgcgctggccgcagccggc
gcccgccacatgttcggcgtcgtgggcatccccgtcacctccctagcctcccgcgccgcc
gccgcgggggtccgcttcctcgccttccgcaacgagcagtcggcgggctacgccgccgcc
gcctacggcttcctcaccggctccccgggactcctcctcaccgtctccggccccggctgc
gtccacggcctcgccggcctctcccacgccaccgccaacgcctggccgctcctcatggtc
tccggctcctgcgaccaggccgacgccggcaggggcgacttccaggagctcgaccagatc
gccgccaccaagcccttcgccaagctcgccgtcaaggccaccaccatcgccgacatcccg
cgcctcgtcttccaggccctcgccgcagccgtctccggccgccctggcggctgctacctt
gacatcccctccgacgttctccaccaaaccctccctcaatccgaggccgcggatctcata
gcagcagcaaaagccgattcggccgcttccaatccatccccgcccaaccagaagccccta
gacgaggccatcgggaaagctgcggacctgctccgccgtgcggagcggcctcttgtcgtc
atcgggaagggtgctgcgtacgcgcgcgcggaggaggccatccggaagctggtggacacc
acgggcatccccttcctcccgacgcctatggggaagggggtcgtgcctgactcgcatccg
ctctctgccacagcggcacgctcgctcgccatcgggcagtgcgatgtggctcttgtcgtc
ggtgccaggcttaattggttgcttcacttcggcgagccacccaagtggtccaaggatgtc
aagttcatacttgtggatgtctgcgaggaggagattgagctccggaaaccacatgtcggg
attgttggtgatgccaagagggtaattgagctgatcaatagggagatcaaggatgatcca
ttctgcttggcaaggtcaaacccatgggttgaagcgatcaccaaaaaggccaaggacaat
gttcttaagatggaggcacagctagcaaaggatgttgtgccgttcaatttcttgacaccg
ttgcggataatccgggatgccatccttgctgaggggagccctgctccgatagtggtctca
gaaggggcaaacaccatggatgttggcagggctgtgctagtgcagaatgaaccaaggaca
agactggatgcagggacatgggggacgatgggggttggattggggtactgtattgctgct
gcagtagccgaacctgaacgacttgtggtcgctgtggagggtgactctggatatggattc
agtgcgatggaggttgagacattggtgaggtaccagctgcccgttgtagtaattgttttc
aacaacaacggtgtctatggtggtgaccggagaagccctgatgagataactggacccttc
aaagatgacccggccccaacttcttttgtcccagcagcaggctaccataaaatgatggaa
gcgtttggaggaaaaggttatcttgtggagacaccagacgagcttaaatctgccctttcg
gaatcattccgtgccaggaaaccagcagtcatcaactgtatcattgatccttacgccggt
gcagagagcggccggatgcagcacaagaactga
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