Panicum virgatum (switchgrass): 120672661
Help
Entry
120672661 CDS
T07260
Name
(RefSeq) probable calcium-binding protein CML10
KO
K13448
calcium-binding protein CML
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120672661
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_1
EF-hand_7
EF-hand_5
EF-hand_6
EF-hand_8
Allatotropin-like_C
AIF-1
EF-hand_FSTL1
EF-hand_9
SPARC_Ca_bdg
EF_SSP120
Dockerin_1
EH
EF_EFCAB10_C
CFAP251_C
EF-hand_EFHB_C
CCD48
OGG
TetR_C_6
Motif
Other DBs
NCBI-GeneID:
120672661
NCBI-ProteinID:
XP_039809120
LinkDB
All DBs
Position
5N:complement(70523119..70523946)
Genome browser
AA seq
187 aa
AA seq
DB search
MGKMRMPVPSLFRLGRRSKSPPPPPQQQAQAAGSPPRTAEEEMARVFRKFDANGDGRISR
SELAALFESLGHAASDDELARMMAEADADGDGFISLDEFAALNATVAGDAAAVEEDLRHA
FRVFDADGNGTISAAELARVLRGLGESASVAQCRRMIEGVDQNGDGLISFEEFKVMMAGG
GCFAKIA
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagatgaggatgcccgtgccctccctgttccgcctcggccgccgctccaagtct
ccgccgccgccgccgcagcagcaggcccaagccgccgggtccccgccgcggacggcggag
gaggagatggcgcgggtgttccgcaagttcgacgccaacggcgacggccggatctcgcgg
tccgagctcgcggccctgttcgagagcctgggccacgccgcctccgacgacgagctggcg
cgcatgatggccgaggcggacgccgacggcgacggcttcatcagcctcgacgagttcgcc
gccctcaacgccaccgtcgcgggcgacgccgccgccgtcgaggaggacctgcgccacgcc
ttccgcgtcttcgacgccgacggcaacggcaccatctccgccgccgagctcgcgcgcgtg
ctccgggggctcggcgagtccgcctccgtcgcccagtgcaggcgcatgatcgagggcgtc
gaccagaacggcgacggcctcatctccttcgaggagttcaaggtcatgatggccgggggc
ggatgcttcgccaagatcgcatag
DBGET
integrated database retrieval system
