Panicum virgatum (switchgrass): 120672810
Help
Entry
120672810 CDS
T07260
Name
(RefSeq) 3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial-like
KO
K00606
3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:
2.1.2.11
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00770
Pantothenate and CoA biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00770 Pantothenate and CoA biosynthesis
120672810
Enzymes [BR:
pvir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.11 3-methyl-2-oxobutanoate hydroxymethyltransferase
120672810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pantoate_transf
PEP_mutase
Motif
Other DBs
NCBI-GeneID:
120672810
NCBI-ProteinID:
XP_039809336
LinkDB
All DBs
Position
5N:1407054..1409452
Genome browser
AA seq
349 aa
AA seq
DB search
MRRSLLVRQLARRLLSNLPESTVYGGPRPQEASAARRVTVTTLRGKHRRGEPITVVTAYD
YPSAVHVDSAGIDVCLVGDSAAMVVHGHDTTLPISLDLMLEHCRAVARGAPRPLLVGDLP
FGCYESSAAQAVDSAVRVLKEGGMDTIKLEGGAPSRITAAKAIVEAGIAVMGHVGLTPQA
ISVLGGFRPQGKTVDSAVKVVETALALQEAGCFSVVLECVPAPVAAAATSALQIPTIGIG
AGPFCSGQVLVYHDLLGMMQHPHYAKVTPKFCKQFGNVGNVINRALSEYKKEVETRTFPG
PSHTPYKIIPTDVDGFATALQKMGLSDAADAAAAAAENSGTDGGPKENS
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgcgccggtccctcctcgtccggcagctggcgcggcggctgctgagcaacttgccggaa
tcgaccgtctacggtgggccgcgcccgcaggaggcctcggcggcgcggcgtgtgacggtg
accaccctccgcgggaagcaccgccgcggagagcccatcaccgtcgtcaccgcctacgac
tacccctcggcggtccacgtcgactccgcgggcatcgacgtctgtctcgtgggggactcc
gccgccatggtcgtccacggccacgacaccacgctccccatctcactcgacctcatgctc
gagcactgccgcgccgtggcccgaggcgcgccacgcccgctgctcgtcggggaccttccc
tttgggtgctacgagtcctcggccgcgcaggctgttgattcagctgtaagggtgctaaaa
gaaggtggaatggatacaatcaagctagaagggggtgcgccgtcgaggatcactgcagct
aaagctatcgtggaggctgggattgctgtcatggggcatgttgggctcacaccgcaagct
attagtgtgctcggtggatttaggcctcaagggaagacagttgatagtgctgtaaaggtt
gtggagacagcgctggctttgcaggaggctggttgcttttcagttgtgttggagtgtgtg
cctgctccagtggcagccgctgcaacatcagcattgcaaatcccaacaattggcataggg
gctggaccattctgcagtggacaggtgttggtctaccatgacttgttggggatgatgcag
cacccacattatgccaaggtcacaccaaaattctgcaaacaatttggcaatgtgggcaat
gtcatcaacagggcgttatcagagtataagaaagaagtggaaactcggacattccctggt
ccaagccacacaccatataaaataattcccacggatgttgatggctttgcaactgcacta
cagaagatgggtttgagtgacgctgcagatgctgcagcagccgctgctgaaaacagtggg
actgatggagggccaaaagaaaatagttga
DBGET
integrated database retrieval system
