Panicum virgatum (switchgrass): 120672931
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Entry
120672931 CDS
T07260
Name
(RefSeq) tubby-like F-box protein 3
KO
K19600
tubby and related proteins
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pvir03037
]
120672931
04990 Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
120672931
Cilium and associated proteins [BR:
pvir03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
120672931
Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
Other domain-containing proteins
Tubby family proteins
120672931
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tub
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
120672931
NCBI-ProteinID:
XP_039809497
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Position
5N:64937450..64940759
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AA seq
468 aa
AA seq
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MSFRSIVRDVRDGFGSLSRRSFEVTLASIYGLTGHHKGKTHSSSHELDDSPSIIRESRWA
SLPPELIRDIIRRLEADESTWPARKHVVCFAAVCRTWREMCKEIVLSPEFCGKLTFPVSL
KQPGPREGNTMIQCFIKRNKSKSTYHLYLCLSNVVTSESGKFLLSARRHRKATCTEYTIS
MDSGSTSRSSRTYIGKIRSNFLGTKFLIYDTQAPYNGAVVPPVGRTSRRFNSTKVSPKLP
SVSYNIAQVSYELNVLGTRGPRRMRCIMHSIPASSVEPGGIVPGQPEQIVPRALEDSFRS
TASFSQSFRSTTSLSKSIMDSSMDFNSARFSDIAGSSARFSGIGSSACISGIASGRLDHH
EDSEIKERPLVLRNKPPRWHEQLQCWCLNFRGRVTIASVKNFQLIAATTPPPAGAPTPSQ
PTPDPDKVILQFGKVARDMFTMDYRYPLSAFQAFAICLSSFDTKLACE
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttcgtagcatagtccgtgatgttagggatggcttcggcagcttgtccagacgc
agctttgaggtgaccctcgcaagcatttatggccttaccgggcatcacaaagggaagacc
catagctcatcgcatgaactcgatgactcgccttccataatccgagaaagccgctgggca
agcctacctcctgaactcatccgtgatataatacggagactcgaggctgacgagagcacc
tggccagcacggaagcatgttgtttgctttgcagctgtttgtaggacatggagggaaatg
tgtaaagagattgtgttgagcccagagttttgtgggaagctcaccttccctgtgtctcta
aaacagcctggtccccgagaaggaaatacaatgattcaatgctttataaagaggaataag
tcaaaatctacctaccatctctacctgtgccttagcaatgttgttacttcagaaagtgga
aaattcctcttatcggctagaagacaccggaaggccacatgcacagagtacactatatca
atggattctggcagcacctcaagatcaagcagaacctacattggaaaaataaggtcgaac
ttccttggcacaaaatttttaatttatgatacacaggccccctataatggggctgtagtt
cctcctgttggaaggaccagtaggaggttcaactccacaaaagtctctccgaagttgcct
tctgttagttacaacatcgctcaggtgtcatatgagctaaacgtccttggcacaagaggt
ccaaggcggatgcgttgcatcatgcactccatacccgcctcatcagtggagccaggtggc
atagtaccaggacagccggagcagattgtacctcgagctctggaggactcattccgcagc
acagcttcattttcgcagtcattccgtagcacaacctcattgtccaagtccatcatggac
tcgtccatggatttcaatagcgctcgcttctccgacattgctggcagcagtgctcgcttc
tcgggcattggcagcagtgcttgtatctcgggcattgctagcggcagattggatcaccac
gaggacagtgaaatcaaggagaggccactggttcttcgtaataagccacctaggtggcat
gaacagctccagtgctggtgtctcaacttccgtggccgtgtgacaatcgcatcggtgaag
aacttccagctgattgccgcaacaaccccaccacccgcaggtgctccaactccctcgcag
cctactccagatcctgacaaagtgattctacagtttggaaaagtggcaagggatatgttc
acgatggactatcgctaccccctctcggctttccaggcgtttgctatctgtctgagcagc
tttgatacaaaattggcctgtgaataa
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